RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 LIMS4P0CW20 117 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 NT5EP21589 574 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 DRD5P21918 477 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 S100A1P23297 94 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 SSTR4P31391 388 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 NR4A2P43354 598 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ETV1P50549 477 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 PRKAG1P54619 331 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 CDH11P55287 796 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 RAB38P57729 211 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 RPS26P62854 115 aaKnown RBP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 IGLV3-21P80748 117 aaPredicted RBP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 MAP4K2Q12851 820 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 AIMP2Q13155 320 aaKnown RBP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 SELENBP1Q13228 472 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 GGTLC2Q14390 218 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 EXOSC7Q15024 291 aaKnown RBP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 LTB4RQ15722 352 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 INPP5JQ15735 1006 aaPredicted RBP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 LCN1P1Q5VSP4 162 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 BICRALQ6AI39 1079 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ACSM5Q6NUN0 579 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 TMEM107Q6UX40 140 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 NDUFAF7Q7L592 441 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 GDPD3Q7L5L3 318 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 FJX1Q86VR8 437 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 CCDC116Q8IYX3 515 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 LSMEM1Q8N8F7 131 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 DUSP18Q8NEJ0 188 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 OR5D16Q8NGK9 328 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 DEDD2Q8WXF8 326 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 KAT2AQ92830 837 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ARSGQ96EG1 525 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 SLC35A4Q96G79 324 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 SDF2Q99470 211 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 C7orf50Q9BRJ6 194 aaKnown RBP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 TTYH2Q9BSA4 534 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF426Q9BUY5 554 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 DEFB126Q9BYW3 111 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 TRIM2Q9C040 744 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 C12orf10Q9HB07 376 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 FOLH1BQ9HBA9 442 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 CMC2Q9NRP2 79 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 PTTG3PQ9NZH4 202 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 RHCGQ9UBD6 479 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 PLEKHB1Q9UF11 243 aaPredicted RBP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ERVK-19Q9WJR5 959 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 NTNG1Q9Y2I2 539 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 FAM166BA8MTA8 275 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 NPIPA5E9PKD4 350 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 CHP2O43745 196 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 PPM1BO75688 479 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 RGS9O75916 674 aaPredicted RBP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 KCNK2O95069 426 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 AGFG2O95081 481 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 LYPD3O95274 346 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 GPR75O95800 540 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 IFNGP01579 166 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 SLC35E2P0CK97 266 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 MC3RP41968 323 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 HTR3AP46098 478 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF136P52737 540 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 CHRNEQ04844 493 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 KLRB1Q12918 225 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 PCOLCEQ15113 449 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 TAB1Q15750 504 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 SLC35D3Q5M8T2 416 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ACER2Q5QJU3 275 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 SLC35F1Q5T1Q4 408 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ARHGAP11AQ6P4F7 1023 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF836Q6ZNA1 936 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 MEPCEQ7L2J0 689 aaKnown RBP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF550Q7Z398 422 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 SYS1Q8N2H4 156 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 VWA5B2Q8N398 1253 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 MS4A15Q8N5U1 240 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ACBD7Q8N6N7 88 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 POMGNT2Q8NAT1 580 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 GPR151Q8TDV0 419 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 THRSPQ92748 146 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 LMF1Q96S06 567 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF649Q9BS31 505 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 BARHL1Q9BZE3 327 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 NDEL1Q9GZM8 345 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 HOXD1Q9GZZ0 328 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 AMBNQ9NP70 447 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 TRIM36Q9NQ86 728 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 LANCL2Q9NS86 450 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 ERVK13-1Q9NX77 482 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 EMC3Q9P0I2 261 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 TBC1D24Q9ULP9 559 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 NPIPA1Q9UND3 350 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 SPIN1Q9Y657 262 aaPredicted RBP4.33□□□□□ -1.72
EDEM3-203ENST00000439962 MYO9AB2RTY4 2548 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 SHANK1Q9Y566 2161 aa4.33□□□□□ -1.72
EDEM3-203ENST00000439962 TRAV1-2A0A0B4J238 106 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 CDHR4A6H8M9 788 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 VSTM2BA6NLU5 285 aa4.32□□□□□ -1.72
EDEM3-203ENST00000439962 C17orf51A8MQB3 221 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms