RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 SRYQ05066 204 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 RPL18Q07020 188 aaKnown RBP11.34□□□□□ -0.59
SCLT1-202ENST00000439369 GXYLT1Q4G148 440 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 ALG10Q5BKT4 473 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 FAM205BPQ63HN1 556 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 GTF2IRD2BQ6EKJ0 949 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 TMEM225Q6GV28 225 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 DPY19L2P2Q6ZN68 376 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 FCRLAQ7L513 359 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 HDDC2Q7Z4H3 204 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 GTF2IRD2Q86UP8 949 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 GALNT4Q8N4A0 578 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 TMEM99Q8N816 258 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 OR51A7Q8NH64 312 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 RNF128Q8TEB7 428 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 WNT2BQ93097 391 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 OXGR1Q96P68 337 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 TNFRSF13CQ96RJ3 184 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 TEX12Q9BXU0 123 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 OR52D1Q9H346 318 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 TP63Q9H3D4 680 aaPredicted RBP11.34□□□□□ -0.59
SCLT1-202ENST00000439369 SLC25A19Q9HC21 320 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 TAS2R5Q9NYW4 299 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 CLCF1Q9UBD9 225 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 DSPP15924 2871 aaKnown RBP11.34□□□□□ -0.59
SCLT1-202ENST00000439369 TLN1Q9Y490 2541 aaKnown RBP11.33□□□□□ -0.6
SCLT1-202ENST00000439369 ITPR1Q14643 2758 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 TRAV27A0A087WT01 109 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 SLC22A20A6NK97 555 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 MS4A18H0YCH9 400 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 BLOC1S5-TXNDC5H3BN57 136 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 H3BN98 237 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 GPR171O14626 319 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 IMPA2O14732 288 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 ARPC3O15145 178 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 SLC19A2O60779 497 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 IGHMP01871 453 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 CD14P08571 375 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 ADORA3P0DMS8 318 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 AQP2P41181 271 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 DAP3P51398 398 aaKnown RBP11.33□□□□□ -0.6
SCLT1-202ENST00000439369 RPS6KA3P51812 740 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 FXYD6P3P58550 94 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 NPRL3Q12980 569 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 SLC17A1Q14916 467 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 PON3Q15166 354 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 EIF2S3LQ2VIR3 472 aaKnown RBP11.33□□□□□ -0.6
SCLT1-202ENST00000439369 MS4A18Q3C1V0 323 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 SLC36A3Q495N2 470 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 ACSF3Q4G176 576 aaPredicted RBP11.33□□□□□ -0.6
SCLT1-202ENST00000439369 EMC4Q5J8M3 183 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 NSUN5P2Q63ZY6 315 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 ANKRD34AQ69YU3 496 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 GPR139Q6DWJ6 353 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 SLC27A4Q6P1M0 643 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 GALNT5Q7Z7M9 940 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 MEX3DQ86XN8 651 aaKnown RBP11.33□□□□□ -0.6
SCLT1-202ENST00000439369 KIF18BQ86Y91 864 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 LRRC75AQ8NAA5 344 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 OR2T33Q8NG76 320 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 ZFP3Q96NJ6 502 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 TM9SF2Q99805 663 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 PRRG3Q9BZD7 231 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 NRIP3Q9NQ35 241 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 INIPQ9NRY2 104 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 PNPLA3Q9NST1 481 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 TBC1D23Q9NUY8 699 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 EMC3Q9P0I2 261 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 KLHL9Q9P2J3 617 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 FREM3P0C091 2139 aa11.33□□□□□ -0.6
SCLT1-202ENST00000439369 A0A1W2PRG6 482 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF716A6NP11 495 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 ZAR1LA6NP61 321 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF724A8MTY0 619 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 E9PQ18 207 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 H0YAE9 185 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 DLGAP1O14490 977 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 SLC16A6O15403 523 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 RNF13O43567 381 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 AKAP8O43823 692 aaKnown RBP11.32□□□□□ -0.6
SCLT1-202ENST00000439369 MITFO75030 526 aaPredicted RBP11.32□□□□□ -0.6
SCLT1-202ENST00000439369 TXNDC12O95881 172 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 CRHP06850 196 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 TPOP07202 933 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF43P17038 809 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 ACVR2AP27037 513 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 GRK5P34947 590 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 RPL4P36578 427 aaKnown RBP11.32□□□□□ -0.6
SCLT1-202ENST00000439369 GIPRP48546 466 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 SMSP52788 366 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 CDK5Q00535 292 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 IL1RL1Q01638 556 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 C1DQ13901 141 aaKnown RBP11.32□□□□□ -0.6
SCLT1-202ENST00000439369 C3AR1Q16581 482 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 C1orf185Q5T7R7 199 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 TTC23Q5W5X9 447 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 CD163Q86VB7 1156 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 UEVLDQ8IX04 471 aa11.32□□□□□ -0.6
SCLT1-202ENST00000439369 LNX2Q8N448 690 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms