RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 HIPK1Q86Z02 1210 aa19.01■□□□□ 0.63
RPUSD3-206ENST00000433535 C10orf105Q8TEF2 133 aa19.01■□□□□ 0.63
RPUSD3-206ENST00000433535 NANOS1Q8WY41 292 aaKnown RBP19.01■□□□□ 0.63
RPUSD3-206ENST00000433535 BOD1Q96IK1 185 aa19.01■□□□□ 0.63
RPUSD3-206ENST00000433535 TNFRSF13CQ96RJ3 184 aa19.01■□□□□ 0.63
RPUSD3-206ENST00000433535 EBF4Q9BQW3 602 aa19.01■□□□□ 0.63
RPUSD3-206ENST00000433535 RPS6KB2Q9UBS0 482 aa19.01■□□□□ 0.63
RPUSD3-206ENST00000433535 POLR3GO15318 223 aaPredicted RBP19■□□□□ 0.63
RPUSD3-206ENST00000433535 BMP4P12644 408 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 SLC25A16P16260 332 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 EFNA4P52798 201 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 ROR2Q01974 943 aaKnown RBP19■□□□□ 0.63
RPUSD3-206ENST00000433535 LOXL1Q08397 574 aaPredicted RBP19■□□□□ 0.63
RPUSD3-206ENST00000433535 MST1LQ2TV78 715 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 LRIF1Q5T3J3 769 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 GCNT6Q5T4J0 391 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 C6orf89Q6UWU4 347 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 FUNDC1Q8IVP5 155 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 BCL2L2Q92843 193 aaPredicted RBP19■□□□□ 0.63
RPUSD3-206ENST00000433535 SLC35B4Q969S0 331 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 KCNS3Q9BQ31 491 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 SEC61A2Q9H9S3 476 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 B3GAT1Q9P2W7 334 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 PMF1-BGLAPU3KQ54 211 aa19■□□□□ 0.63
RPUSD3-206ENST00000433535 YLPM1P49750 1951 aaKnown RBP18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 A0A1B0GWA3 101 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 M0R082 166 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 CECR9P0C854 216 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 ARAFP10398 606 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 ETS2P15036 469 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 PRKAR1BP31321 381 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 MRPL19P49406 292 aaKnown RBP18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 IDH3AP50213 366 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 SWI5Q1ZZU3 235 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 GLIPR1L2Q4G1C9 344 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 BLOC1S3Q6QNY0 202 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 ZNF417Q8TAU3 575 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 SPDL1Q96EA4 605 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 SORCS2Q96PQ0 1159 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 ZNF587Q96SQ5 575 aaPredicted RBP18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 KATNB1Q9BVA0 655 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 PRR14Q9BWN1 585 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 LINC00470Q9BZP3 86 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 MED4Q9NPJ6 270 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 CCDC167Q9P0B6 97 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 VAPAQ9P0L0 249 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 RCE1Q9Y256 329 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 COL6A5A8TX70 2615 aa18.99■□□□□ 0.63
RPUSD3-206ENST00000433535 IGKV1D-42A0A075B6H8 117 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 ARPC4-TTLL3A0A0A6YYG9 625 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 OR6C65A6NJZ3 312 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 TPST1O60507 370 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 ZNF432O94892 652 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 TGDSO95455 350 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 ZNF16P17020 682 aaPredicted RBP18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 ZNF43P17038 809 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 CBLP22681 906 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 VLDLRP98155 873 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 NAAAQ02083 359 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 CHRFAM7AQ494W8 412 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 PAGE3Q5JUK9 113 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 ANKRD16Q6P6B7 361 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 MYPOPQ86VE0 399 aaPredicted RBP18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 TAAR8Q969N4 342 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 IKZF5Q9H5V7 419 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 CA10Q9NS85 328 aa18.98■□□□□ 0.63
RPUSD3-206ENST00000433535 FZD7O75084 574 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 CRYAAP02489 173 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 CELA3BP08861 270 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 CSF3P09919 207 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 GRPRP30550 384 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 CALCRP30988 508 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 SNRPD2P62316 118 aaKnown RBP18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 ARF1P84077 181 aaKnown RBP18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 CDK6Q00534 326 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 IL1RL1Q01638 556 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 C1DQ13901 141 aaKnown RBP18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 ALG10BQ5I7T1 473 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 FAM69AQ5T7M9 428 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 VHLLQ6RSH7 139 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 LSMEM1Q8N8F7 131 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 SLC38A4Q969I6 547 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 OXGR1Q96P68 337 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 C12orf10Q9HB07 376 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 SLC52A3Q9NQ40 469 aa18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 CRNNQ9UBG3 495 aaPredicted RBP18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 FBN1P35555 2871 aaKnown RBP18.97■□□□□ 0.63
RPUSD3-206ENST00000433535 AIM2O14862 343 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 SLC43A1O75387 559 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 SEC14L2O76054 403 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 F12P00748 615 aaPredicted RBP18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 AQP1P29972 269 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 SERPINF1P36955 418 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 SH3BGRP55822 239 aaPredicted RBP18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 ADIPOQQ15848 244 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 HSP90B2PQ58FF3 399 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 REEP3Q6NUK4 255 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 DHRS4L2Q6PKH6 230 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 SLC46A3Q7Z3Q1 461 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 GPR137CQ8N3F9 429 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms