RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RPL36A-HNRNPH2H7BZ11 118 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 OR2T1O43869 369 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 FZD7O75084 574 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 LY6HO94772 140 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 IGKV3-15P01624 115 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 IGLV1-44P01699 117 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 PNMTP11086 282 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 PRG2P13727 222 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 ZNF43P17038 809 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 NR4A2P43354 598 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 PPOXP50336 477 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 POLR2JP52435 117 aaKnown RBP12.96□□□□□ -0.33
MSH5-208ENST00000429846 ZNF311Q5JNZ3 666 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 RPS26P11Q5JNZ5 115 aaPredicted RBP12.96□□□□□ -0.33
MSH5-208ENST00000429846 C6orf10Q5SRN2 563 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 FAM166AQ6J272 317 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 C6orf89Q6UWU4 347 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 ZNF540Q8NDQ6 660 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 NUP37Q8NFH4 326 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 OR4F15Q8NGB8 312 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 BBS10Q8TAM1 723 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 VPS33AQ96AX1 596 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 PTDSS2Q9BVG9 487 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 BCL2L10Q9HD36 194 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 KCNS2Q9ULS6 477 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 CHST2Q9Y4C5 530 aa12.96□□□□□ -0.33
MSH5-208ENST00000429846 UBDO15205 165 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 AKAP8O43823 692 aaKnown RBP12.95□□□□□ -0.34
MSH5-208ENST00000429846 UPK3AO75631 287 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 CECR9P0C854 216 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 BMP2P12643 396 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 ROR2Q01974 943 aaKnown RBP12.95□□□□□ -0.34
MSH5-208ENST00000429846 LGALS3BPQ08380 585 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 GGTLC2Q14390 218 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 RGNQ15493 299 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 ADIPOQQ15848 244 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 GTDC1Q4AE62 458 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 FAM69AQ5T7M9 428 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 LINGO2Q7L985 606 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 LSRQ86X29 649 aaPredicted RBP12.95□□□□□ -0.34
MSH5-208ENST00000429846 VRK1Q99986 396 aaPredicted RBP12.95□□□□□ -0.34
MSH5-208ENST00000429846 NELFAQ9H3P2 528 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 PLK3Q9H4B4 646 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 ZNF442Q9H7R0 627 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 A4GALTQ9NPC4 353 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 RPS6KB2Q9UBS0 482 aa12.95□□□□□ -0.34
MSH5-208ENST00000429846 VSTM5A8MXK1 200 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 AIM2O14862 343 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 SLC43A1O75387 559 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 ZNF432O94892 652 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 ERCC1P07992 297 aaPredicted RBP12.94□□□□□ -0.34
MSH5-208ENST00000429846 OR4A8P0C604 315 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 APEHP13798 732 aaKnown RBP12.94□□□□□ -0.34
MSH5-208ENST00000429846 ETS2P15036 469 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 SRD5A1P18405 259 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 HNF1AP20823 631 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 IGFBP5P24593 272 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 PRKAR1BP31321 381 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 RPS5P46782 204 aaKnown RBP12.94□□□□□ -0.34
MSH5-208ENST00000429846 CLDN17P56750 224 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 EGR4Q05215 589 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 SLC9B1Q4ZJI4 515 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 CCDC36Q8IYA8 594 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 MIER2Q8N344 545 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 LSMEM1Q8N8F7 131 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 OR9I1Q8NGQ6 314 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 GTF2H4Q92759 462 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 SLC38A4Q969I6 547 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 SLC25A36Q96CQ1 311 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 OXGR1Q96P68 337 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 PRR14Q9BWN1 585 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 RAB1BQ9H0U4 201 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 NKIRAS1Q9NYS0 192 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 PCDHB14Q9Y5E9 798 aa12.94□□□□□ -0.34
MSH5-208ENST00000429846 A0A096LPE4 126 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 LOC100289279A0A1B0GTE1 492 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 A0A1W2PPZ6 126 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 C5orf58C9J3I9 102 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 CLIC1O00299 241 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 NR5A2O00482 541 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 CBR1P16152 277 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 ARR3P36575 388 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 MRPL19P49406 292 aaKnown RBP12.93□□□□□ -0.34
MSH5-208ENST00000429846 IDH3GP51553 393 aaPredicted RBP12.93□□□□□ -0.34
MSH5-208ENST00000429846 MFSD13AQ14CX5 517 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 MAVSQ7Z434 540 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 NET1Q7Z628 596 aaPredicted RBP12.93□□□□□ -0.34
MSH5-208ENST00000429846 GPR137CQ8N3F9 429 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 GOLGA6L1Q8N7Z2 621 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 ADPRHL1Q8NDY3 354 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 PIK3C3Q8NEB9 887 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 MGARPQ8TDB4 240 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 DNAJA4Q8WW22 397 aaPredicted RBP12.93□□□□□ -0.34
MSH5-208ENST00000429846 MSI2Q96DH6 328 aaKnown RBP12.93□□□□□ -0.34
MSH5-208ENST00000429846 KTI12Q96EK9 354 aaPredicted RBP12.93□□□□□ -0.34
MSH5-208ENST00000429846 ANKRD27Q96NW4 1050 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 PAIP1Q9H074 479 aaKnown RBP12.93□□□□□ -0.34
MSH5-208ENST00000429846 B3GAT1Q9P2W7 334 aa12.93□□□□□ -0.34
MSH5-208ENST00000429846 IGHV4-61A0A0C4DH41 118 aa12.92□□□□□ -0.34
MSH5-208ENST00000429846 LOC102725191A0A1B0GVB3 256 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms