RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SLC26A5P58743 744 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 AP1S1P61966 158 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 UBE2IP63279 158 aaKnown RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 TLE4Q04727 773 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 EPS8Q12929 822 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZMYND11Q15326 602 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 PTPN20Q4JDL3 420 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 AGAP7PQ5VUJ5 663 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 FAM205BPQ63HN1 556 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 MFSD12Q6NUT3 480 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 C6orf89Q6UWU4 347 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 C4orf22Q6V702 233 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 FAM92BQ6ZTR7 304 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 RFPL4BQ6ZWI9 263 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 TRPM8Q7Z2W7 1104 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 GPR141Q7Z602 305 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLFN11Q7Z7L1 901 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 TGIF2LYQ8IUE0 185 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 UMODL1-AS1Q8N2C9 162 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 BBS5Q8N3I7 341 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 NATD1Q8N6N6 113 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC37A3Q8NCC5 494 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 OR56B2PQ8NGI1 322 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 OR10Z1Q8NGY1 313 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 NTAN1Q96AB6 310 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 NXNL1Q96CM4 212 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 COX14Q96I36 57 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 C4orf45Q96LM5 186 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 TMEM237Q96Q45 408 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 BCL7BQ9BQE9 202 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 ABCG8Q9H221 673 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 TRIM45Q9H8W5 580 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZC4H2Q9NQZ6 224 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 NMRK1Q9NWW6 199 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 EXTL2Q9UBQ6 330 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 KCNN3Q9UGI6 736 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 CD300AQ9UGN4 299 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 SPATA2Q9UM82 520 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 NTNG1Q9Y2I2 539 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 GTF3C1Q12789 2109 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 PRRC2AP48634 2157 aaKnown RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 VPS13CQ709C8 3753 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 IGHV5-51A0A0C4DH38 117 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 A0A0U1RQS6 177 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 A0A1B0GWJ7 208 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 hCG_1807616A0A1W2PRN6 198 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 RGSL1A5PLK6 1076 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CFAP73A6NFT4 308 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 A8MU10 97 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 HSBP1L1C9JCN9 74 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 H7C0S8 307 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 FBP2O00757 339 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 PSMA7O14818 248 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 PFDN6O15212 129 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 EIF3HO15372 352 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 BCL2L11O43521 198 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 VEGFDO43915 354 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 SMPD2O60906 423 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CLN5O75503 358 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 SERPINB7O75635 380 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 GLAP06280 429 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 KRT16P08779 473 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 ANXA8P13928 327 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CYP11B1P15538 503 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 IDSP22304 550 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 OTX2P32243 289 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CDH5P33151 784 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CA5AP35218 305 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC26A3P40879 764 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CA7P43166 264 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZNF75DP51815 510 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CARD18P57730 90 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 TSPAN5P62079 268 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 IL10RBQ08334 325 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 STX3Q13277 289 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 RIPK1Q13546 671 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CDO1Q16878 200 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 ARMC12Q5T9G4 340 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 ANXA8L1Q5VT79 327 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 ANKRD20A3Q5VUR7 823 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CLEC2AQ6UVW9 174 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 IGFL2Q6UWQ7 119 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 WASH2PQ6VEQ5 465 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 HSD11B1LQ7Z5J1 315 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 ABHD12Q8N2K0 398 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZNF321PQ8N8H1 164 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 ANKFN1Q8N957 763 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CHPT1Q8WUD6 406 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 HEXDCQ8WVB3 486 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 RASSF5Q8WWW0 418 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 PTERQ96BW5 349 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 LRRC39Q96DD0 335 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 CXorf40BQ96DE9 158 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 PDLIM5Q96HC4 596 aaKnown RBP3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 VPS35Q96QK1 796 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC29A1Q99808 456 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 FOXC2Q99958 501 aa3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 TDRD1Q9BXT4 1180 aaKnown RBP3.85□□□□□ -1.79
HMGB3P5-201ENST00000428894 C6orf62Q9GZU0 229 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms