RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 MRPL39Q9NYK5 338 aaKnown RBP7.09□□□□□ -1.27
HMGA1P4-201ENST00000428643 REV1Q9UBZ9 1251 aa7.09□□□□□ -1.27
HMGA1P4-201ENST00000428643 MCTS1Q9ULC4 181 aaKnown RBP7.09□□□□□ -1.27
HMGA1P4-201ENST00000428643 HIF3AQ9Y2N7 669 aa7.09□□□□□ -1.27
HMGA1P4-201ENST00000428643 IGSF10Q6WRI0 2623 aa7.09□□□□□ -1.27
HMGA1P4-201ENST00000428643 CNTRLQ7Z7A1 2325 aa7.09□□□□□ -1.28
HMGA1P4-201ENST00000428643 LOC400499M0QZD8 3231 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC22A20A6NK97 555 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 FIGNL2A6NMB9 653 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 CLCA1A8K7I4 914 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF814B7Z6K7 855 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 PLPP3O14495 311 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 SMAD9O15198 467 aaKnown RBP7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 PPP1R3DO95685 299 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 PLGP00747 810 aaPredicted RBP7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 F13BP05160 661 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 FCGR2AP12318 317 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 PRPS1P60891 318 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ESRRGP62508 458 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 POU3F1Q03052 451 aaPredicted RBP7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 RBPJQ06330 500 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 PUDPQ08623 228 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ANKDD1AQ495B1 522 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ACSF3Q4G176 576 aaPredicted RBP7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ALG10Q5BKT4 473 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 TMEM225Q6GV28 225 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF585AQ6P3V2 769 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 PLXDC2Q6UX71 529 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 Q6ZPB1 254 aaPredicted RBP7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 P4HA3Q7Z4N8 544 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 FGD2Q7Z6J4 655 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 CD163Q86VB7 1156 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 CCDC103Q8IW40 242 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 CLDN22Q8N7P3 220 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 TMEM99Q8N816 258 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ADPRHL1Q8NDY3 354 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF555Q8NEP9 628 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ANKK1Q8NFD2 765 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR2T33Q8NG76 320 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR8D4Q8NGM9 314 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 FNDC9Q8TBE3 224 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 LIPHQ8WWY8 451 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ROBO4Q8WZ75 1007 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 RDH12Q96NR8 316 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 TRIB1Q96RU8 372 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ADI1Q9BV57 179 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 KATNB1Q9BVA0 655 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 TSSK6Q9BXA6 273 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 TEX12Q9BXU0 123 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 INIPQ9NRY2 104 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 PNPLA3Q9NST1 481 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 KLHL13Q9P2N7 655 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 SIGLEC7Q9Y286 467 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 B3GALT5Q9Y2C3 310 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF175Q9Y473 711 aa7.08□□□□□ -1.28
HMGA1P4-201ENST00000428643 GCN1Q92616 2671 aaKnown RBP7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 A0A1W2PNV4 684 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 A0A1W2PRG6 482 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 RIIAD1A6NNX1 92 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 MCIDASD6RGH6 385 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC19A2O60779 497 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 RAMP1O60894 148 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 FZD7O75084 574 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 CD14P08571 375 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 EDN3P14138 238 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 EPHA2P29317 976 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 NOS3P29474 1203 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 POLR2IP36954 125 aaKnown RBP7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 DAP3P51398 398 aaKnown RBP7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 AGFG1P52594 562 aaKnown RBP7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 SMSP52788 366 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 CRISP1P54107 249 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 FXYD6P3P58550 94 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 ERVK-25P63136 954 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 NPRL3Q12980 569 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 FHL1Q13642 323 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 GINS1Q14691 196 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 PGGHGQ32M88 737 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 C6orf52Q5T4I8 152 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 EEF1A1P5Q5VTE0 462 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 ABLIM2Q6H8Q1 611 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC27A4Q6P1M0 643 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 THSD4Q6ZMP0 1018 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 FCRLAQ7L513 359 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 CHERPQ8IWX8 916 aaKnown RBP7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 UEVLDQ8IX04 471 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 MCEMP1Q8IX19 187 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC43A2Q8N370 569 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 KDM8Q8N371 416 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 DHRSXQ8N5I4 330 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 LSM14AQ8ND56 463 aaKnown RBP7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR9K2Q8NGE7 335 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR4Q3Q8NH05 313 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 FAM81AQ8TBF8 368 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 FAM57AQ8TBR7 257 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 RNF128Q8TEB7 428 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 ABHD3Q8WU67 409 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 PLEKHA8Q96JA3 519 aa7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 GPX7Q96SL4 187 aaPredicted RBP7.07□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF184Q99676 751 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms