RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 KBTBD8Q8NFY9 601 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 MFSD8Q8NHS3 518 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 DNAJA4Q8WW22 397 aaPredicted RBP11.17□□□□□ -0.62
SGCE-203ENST00000425444 SLC38A4Q969I6 547 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 KTI12Q96EK9 354 aaPredicted RBP11.17□□□□□ -0.62
SGCE-203ENST00000425444 SLC47A1Q96FL8 570 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 ZNF385AQ96PM9 386 aaKnown RBP11.17□□□□□ -0.62
SGCE-203ENST00000425444 PRR14Q9BWN1 585 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 SLCO5A1Q9H2Y9 848 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 EVA1AQ9H8M9 152 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 NPAP1Q9NZP6 1156 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 LAMP3Q9UQV4 416 aa11.17□□□□□ -0.62
SGCE-203ENST00000425444 DPRXA6NFQ7 191 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 ABCD4O14678 606 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 MFN2O95140 757 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 ITGA5P08648 1049 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 CDH2P19022 906 aaPredicted RBP11.16□□□□□ -0.62
SGCE-203ENST00000425444 CBLP22681 906 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 MPGP29372 298 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 ZNF83P51522 516 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 RPS4XP62701 263 aaKnown RBP11.16□□□□□ -0.62
SGCE-203ENST00000425444 GUCY1A3Q02108 690 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 EGR4Q05215 589 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 CYLC2Q14093 348 aaPredicted RBP11.16□□□□□ -0.62
SGCE-203ENST00000425444 OR1Q1Q15612 314 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 ETFDHQ16134 617 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 ZNF672Q499Z4 452 aaPredicted RBP11.16□□□□□ -0.62
SGCE-203ENST00000425444 FAM69AQ5T7M9 428 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 INTS11Q5TA45 600 aaKnown RBP11.16□□□□□ -0.62
SGCE-203ENST00000425444 FAM91A1Q658Y4 838 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 NIPAL3Q6P499 406 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 ULK3Q6PHR2 472 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 KLHL17Q6TDP4 642 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 KLHL24Q6TFL4 600 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 C6orf89Q6UWU4 347 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 SEZ6L2Q6UXD5 910 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 ABHD12BQ7Z5M8 362 aaPredicted RBP11.16□□□□□ -0.62
SGCE-203ENST00000425444 OR10A6Q8NH74 314 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 SLC26A7Q8TE54 656 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 NEUROG1Q92886 237 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 EPYCQ99645 322 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 PTDSS2Q9BVG9 487 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 RSPO3Q9BXY4 272 aaPredicted RBP11.16□□□□□ -0.62
SGCE-203ENST00000425444 PIF1Q9H611 641 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 KAT8Q9H7Z6 458 aaKnown RBP11.16□□□□□ -0.62
SGCE-203ENST00000425444 DYSFO75923 2080 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 NBEAL2Q6ZNJ1 2754 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 PRR14LQ5THK1 2151 aa11.16□□□□□ -0.62
SGCE-203ENST00000425444 TRAV36DV7A0A075B6V5 113 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 BBIP1A8MTZ0 92 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 FTCDNL1E5RQL4 147 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 ZNF587BE7ETH6 402 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 M0QX08 132 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 M0R082 166 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 M0R1B8 84 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 M0R3H8 397 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 MRASO14807 208 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 AIM2O14862 343 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 TMCC2O75069 709 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 NQO1P15559 274 aaKnown RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 ZNF43P17038 809 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 PTNP21246 168 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 SELENOPP49908 381 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 P2RY4P51582 365 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 CDH11P55287 796 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 FOXG1P55316 489 aaPredicted RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 PCBP3P57721 371 aaKnown RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 C1DQ13901 141 aaKnown RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 GABRA6Q16445 453 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 C6orf52Q5T4I8 152 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 REP15Q6BDI9 236 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 CGB2Q6NT52 195 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 SLC22A25Q6T423 547 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 TMEM108Q6UXF1 575 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 CREB3L2Q70SY1 520 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 NET1Q7Z628 596 aaPredicted RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 PATL1Q86TB9 770 aaKnown RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 KDM8Q8N371 416 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 C17orf78Q8N4C9 275 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 C1orf162Q8NEQ5 155 aaPredicted RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 VANGL1Q8TAA9 524 aaPredicted RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 ZNF417Q8TAU3 575 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 SMAP2Q8WU79 429 aaPredicted RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 GTPBP3Q969Y2 492 aaKnown RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 MUS81Q96NY9 551 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 ALKBH3Q96Q83 286 aaPredicted RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 ZNF587Q96SQ5 575 aaPredicted RBP11.15□□□□□ -0.62
SGCE-203ENST00000425444 KCNK17Q96T54 332 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 MCHR1Q99705 422 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 SH3GL1Q99961 368 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 ALG2Q9H553 416 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 MED4Q9NPJ6 270 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 POU2F3Q9UKI9 436 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 MGAT4BQ9UQ53 548 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 AMDHD2Q9Y303 409 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 SLC25A15Q9Y619 301 aa11.15□□□□□ -0.62
SGCE-203ENST00000425444 IGKV1D-42A0A075B6H8 117 aa11.14□□□□□ -0.63
SGCE-203ENST00000425444 A0A087WUJ7 227 aa11.14□□□□□ -0.63
SGCE-203ENST00000425444 A0A0B4J2E0 115 aa11.14□□□□□ -0.63
SGCE-203ENST00000425444 A0A1B0GX12 115 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms