RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 KATNB1Q9BVA0 655 aa18.98■□□□□ 0.63
ACTB-203ENST00000417101 LINC00470Q9BZP3 86 aa18.98■□□□□ 0.63
ACTB-203ENST00000417101 TMBIM4Q9HC24 238 aa18.98■□□□□ 0.63
ACTB-203ENST00000417101 RPS6KB2Q9UBS0 482 aa18.98■□□□□ 0.63
ACTB-203ENST00000417101 SEC14L4Q9UDX3 406 aa18.98■□□□□ 0.63
ACTB-203ENST00000417101 ARPC4-TTLL3A0A0A6YYG9 625 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 ZNF43P17038 809 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 HOXB9P17482 250 aaPredicted RBP18.97■□□□□ 0.63
ACTB-203ENST00000417101 USF1P22415 310 aaPredicted RBP18.97■□□□□ 0.63
ACTB-203ENST00000417101 SERPINF1P36955 418 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 STX1BP61266 288 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 SNRPD2P62316 118 aaKnown RBP18.97■□□□□ 0.63
ACTB-203ENST00000417101 ROR2Q01974 943 aaKnown RBP18.97■□□□□ 0.63
ACTB-203ENST00000417101 ANKRD16Q6P6B7 361 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 GOLGA6L1Q8N7Z2 621 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 MAGEE2Q8TD90 523 aaPredicted RBP18.97■□□□□ 0.63
ACTB-203ENST00000417101 SORCS2Q96PQ0 1159 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 ZNF317Q96PQ6 595 aaPredicted RBP18.97■□□□□ 0.63
ACTB-203ENST00000417101 REPIN1Q9BWE0 567 aaKnown RBP18.97■□□□□ 0.63
ACTB-203ENST00000417101 RSPO3Q9BXY4 272 aaPredicted RBP18.97■□□□□ 0.63
ACTB-203ENST00000417101 NELFAQ9H3P2 528 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 CA10Q9NS85 328 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 CDC42EP3Q9UKI2 254 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 FKBP7Q9Y680 259 aa18.97■□□□□ 0.63
ACTB-203ENST00000417101 ETS2P15036 469 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 PAX7P23759 505 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 SH3BGRP55822 239 aaPredicted RBP18.96■□□□□ 0.63
ACTB-203ENST00000417101 NAAAQ02083 359 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 CYB5R2Q6BCY4 276 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 VHLLQ6RSH7 139 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 SLC46A3Q7Z3Q1 461 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 NFKBIDQ8NI38 313 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 TAAR8Q969N4 342 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 OXGR1Q96P68 337 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 VRK1Q99986 396 aaPredicted RBP18.96■□□□□ 0.63
ACTB-203ENST00000417101 SEC61A2Q9H9S3 476 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 SLC25A37Q9NYZ2 338 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 B3GAT1Q9P2W7 334 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 CRNNQ9UBG3 495 aaPredicted RBP18.96■□□□□ 0.63
ACTB-203ENST00000417101 RCE1Q9Y256 329 aa18.96■□□□□ 0.63
ACTB-203ENST00000417101 A0A1B0GWA3 101 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 M0R082 166 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 SLC43A1O75387 559 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 ZNF432O94892 652 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 CECR9P0C854 216 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 FAM157CP0CG43 387 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 IGHV4-31P0DP07 118 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 PRKAR1BP31321 381 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 PDLIM4P50479 330 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 ARF1P84077 181 aaKnown RBP18.95■□□□□ 0.62
ACTB-203ENST00000417101 C1DQ13901 141 aaKnown RBP18.95■□□□□ 0.62
ACTB-203ENST00000417101 C6orf89Q6UWU4 347 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 COMTD1Q86VU5 262 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 MSRB3Q8IXL7 192 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 ANKS4BQ8N8V4 417 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 ZNF417Q8TAU3 575 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 ZNF587Q96SQ5 575 aaPredicted RBP18.95■□□□□ 0.62
ACTB-203ENST00000417101 C12orf10Q9HB07 376 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 TCF7L2Q9NQB0 619 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 SLAMF8Q9P0V8 285 aa18.95■□□□□ 0.62
ACTB-203ENST00000417101 YLPM1P49750 1951 aaKnown RBP18.94■□□□□ 0.62
ACTB-203ENST00000417101 AIM2O14862 343 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 POLR3GO15318 223 aaPredicted RBP18.94■□□□□ 0.62
ACTB-203ENST00000417101 OR2T1O43869 369 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 IGLV1-44P01699 117 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 OR4A8P0C604 315 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 ARAFP10398 606 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 ZNF16P17020 682 aaPredicted RBP18.94■□□□□ 0.62
ACTB-203ENST00000417101 HTR2AP28223 471 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 CALCRP30988 508 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 LSM11P83369 360 aaKnown RBP eCLIP18.94■□□□□ 0.621e-18■■■□□ 17.5
ACTB-203ENST00000417101 IL1RL1Q01638 556 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 GGTLC2Q14390 218 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 ADIPOQQ15848 244 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 CARTPTQ16568 116 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 C3orf36Q3SXR2 165 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 LRIF1Q5T3J3 769 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 GCNT6Q5T4J0 391 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 FAM69AQ5T7M9 428 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 FUNDC1Q8IVP5 155 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 C10orf111Q8N326 155 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 GPR137CQ8N3F9 429 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 LSMEM1Q8N8F7 131 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 SLC38A4Q969I6 547 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 PIMREGQ9BSJ6 248 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 PRR14Q9BWN1 585 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 BEX2Q9BXY8 128 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 SVEP1Q4LDE5 3571 aa18.94■□□□□ 0.62
ACTB-203ENST00000417101 IGKV1D-42A0A075B6H8 117 aa18.93■□□□□ 0.62
ACTB-203ENST00000417101 VWC2LB2RUY7 222 aa18.93■□□□□ 0.62
ACTB-203ENST00000417101 B9A039 149 aa18.93■□□□□ 0.62
ACTB-203ENST00000417101 RPL36A-HNRNPH2H7BZ11 118 aa18.93■□□□□ 0.62
ACTB-203ENST00000417101 FZD7O75084 574 aa18.93■□□□□ 0.62
ACTB-203ENST00000417101 HOXB1P14653 301 aaPredicted RBP18.93■□□□□ 0.62
ACTB-203ENST00000417101 CBLP22681 906 aa18.93■□□□□ 0.62
ACTB-203ENST00000417101 GRPRP30550 384 aa18.93■□□□□ 0.62
ACTB-203ENST00000417101 MRPL19P49406 292 aaKnown RBP18.93■□□□□ 0.62
ACTB-203ENST00000417101 CDK6Q00534 326 aa18.93■□□□□ 0.62
ACTB-203ENST00000417101 GLIPR1L2Q4G1C9 344 aa18.93■□□□□ 0.62
ACTB-203ENST00000417101 ALG10BQ5I7T1 473 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms