RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 RINLQ6ZS11 566 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 GLCCI1Q86VQ1 547 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 CDK20Q8IZL9 346 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 TRIML2Q8N7C3 387 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 MFSD8Q8NHS3 518 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 SGMS2Q8NHU3 365 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 KIF18AQ8NI77 898 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 STK35Q8TDR2 534 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.28□□□□□ -0.28
DDX56-202ENST00000415758 METTL17Q9H7H0 456 aaPredicted RBP13.28□□□□□ -0.28
DDX56-202ENST00000415758 LGALS13Q9UHV8 139 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 SPEF1Q9Y4P9 236 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 DSPPQ9NZW4 1301 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 TMEM89A2RUT3 159 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 ZNF503-AS2A6NEH8 195 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 E9PBE3 544 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 LYNX1G3V0Z9 82 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 FZD7O75084 574 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 LYNX1P0DP58 116 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 NR4A1P22736 598 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 CLDN17P56750 224 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 CCNIQ14094 377 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 DAG1Q14118 895 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 SLC9B1Q4ZJI4 515 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 ELFN2Q5R3F8 820 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 ZNF781Q8N8C0 355 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 OR52P1PQ8NH57 321 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 TMEM186Q96B77 213 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 PPP1R36Q96LQ0 422 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 PANX1Q96RD7 426 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 MS4A5Q9H3V2 200 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 NOX3Q9HBY0 568 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 GPR35Q9HC97 309 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.27□□□□□ -0.29
DDX56-202ENST00000415758 CMAHPQ9Y471 501 aa13.27□□□□□ -0.29
DDX56-202ENST00000415758 MEGF8Q7Z7M0 2845 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 ITM2AO43736 263 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 SYNGR3O43761 229 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 TYROBPO43914 113 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 MYZAPP0CAP1 466 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 PNMTP11086 282 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 ZNF43P17038 809 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 IL1RL1Q01638 556 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 LRRC74AQ0VAA2 488 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 SNTB2Q13425 540 aaKnown RBP13.26□□□□□ -0.29
DDX56-202ENST00000415758 LIN52Q52LA3 116 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 COX20Q5RI15 118 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 RNF220Q5VTB9 566 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 ZNF836Q6ZNA1 936 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 USP43Q70EL4 1123 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 VRK2Q86Y07 508 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 NUDCD3Q8IVD9 361 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 KDM8Q8N371 416 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 CADM2Q8N3J6 435 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 CLDND2Q8NHS1 167 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 FAM216AQ8WUB2 273 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 MRPL24Q96A35 216 aaKnown RBP13.26□□□□□ -0.29
DDX56-202ENST00000415758 ZNF837Q96EG3 531 aaPredicted RBP13.26□□□□□ -0.29
DDX56-202ENST00000415758 TEX37Q96LM6 180 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 OXGR1Q96P68 337 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 PTDSS2Q9BVG9 487 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 CRLF2Q9HC73 371 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 HIF1ANQ9NWT6 349 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 B3GNT2Q9NY97 397 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 B3GAT1Q9P2W7 334 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 USP22Q9UPT9 525 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 RAP2CQ9Y3L5 183 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 GRIP1Q9Y3R0 1128 aa13.26□□□□□ -0.29
DDX56-202ENST00000415758 LOC102725191A0A1B0GVB3 256 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 FAM157AC9JC47 383 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 SLC43A1O75387 559 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 AHSA1O95433 338 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 TFP02787 698 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 MSMBP08118 114 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 CREB1P16220 341 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 LBPP18428 481 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 ACHEP22303 614 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 CDKN2CP42773 168 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 MVDP53602 400 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 TMEM33P57088 247 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 EGR4Q05215 589 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 NPRL3Q12980 569 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 MSMPQ1L6U9 139 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 CEACAM16Q2WEN9 425 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 KRT80Q6KB66 452 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 OGFOD2Q6N063 350 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 ZNF621Q6ZSS3 439 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 MDP1Q86V88 176 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 CLIP4Q8N3C7 705 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 C3orf56Q8N813 242 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 ZNF418Q8TF45 676 aaPredicted RBP13.25□□□□□ -0.29
DDX56-202ENST00000415758 ZNF75AQ96N20 296 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 MRPL37Q9BZE1 423 aaKnown RBP13.25□□□□□ -0.29
DDX56-202ENST00000415758 C20orf27Q9GZN8 174 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 TPK1Q9H3S4 243 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 CALML5Q9NZT1 146 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 REV1Q9UBZ9 1251 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 CHST2Q9Y4C5 530 aa13.25□□□□□ -0.29
DDX56-202ENST00000415758 ZNF99A8MXY4 864 aaPredicted RBP13.24□□□□□ -0.29
DDX56-202ENST00000415758 M0R233 179 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms