RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 NPEPL1Q8NDH3 523 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 TMEM52Q8NDY8 209 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 OR52I2Q8NH67 350 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 OR1E3Q8WZA6 343 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 NSMAFQ92636 917 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 RBM18Q96H35 190 aaKnown RBP8.97□□□□□ -0.97
CD44-206ENST00000415148 WDR92Q96MX6 357 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 PTCHD1Q96NR3 888 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 CCNL2Q96S94 520 aaPredicted RBP8.97□□□□□ -0.97
CD44-206ENST00000415148 PDCD1LG2Q9BQ51 273 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 SLC25A18Q9H1K4 315 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 NOX4Q9NPH5 578 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 C12orf4Q9NQ89 552 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 RDH8Q9NYR8 311 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 MAB21L2Q9Y586 359 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 ATG2BQ96BY7 2078 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 TCRBV16S1A1N1A0A5B0 115 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 ANKRD20A5PA0PJZ0 165 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 FAM221BA6H8Z2 402 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 EFCAB7A8K855 629 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 M0R233 179 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 PSMD9O00233 223 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 ARPC1BO15143 372 aaKnown RBP8.97□□□□□ -0.97
CD44-206ENST00000415148 SLC31A1O15431 190 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 CBX7O95931 251 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 IGF2P01344 180 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 IL5P05113 134 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 TACSTD2P09758 323 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 ANXA7P20073 488 aaKnown RBP8.97□□□□□ -0.97
CD44-206ENST00000415148 KIR2DL1P43626 348 aaPredicted RBP8.97□□□□□ -0.97
CD44-206ENST00000415148 EMDP50402 254 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 SCAND1P57086 179 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 RAB38P57729 211 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 PSG6Q00889 435 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 OPCMLQ14982 345 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 C2orf68Q2NKX9 166 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 FAM198BQ6UWH4 519 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 LINGO2Q7L985 606 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 ZAR1Q86SH2 424 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 STPG2Q8N412 459 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 OR52R1Q8NGF1 315 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 OR52B4Q8NGK2 314 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 BAHD1Q8TBE0 780 aaPredicted RBP8.97□□□□□ -0.97
CD44-206ENST00000415148 SFXN2Q96NB2 322 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 GPR174Q9BXC1 333 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 GSX2Q9BZM3 304 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 SLC19A3Q9BZV2 496 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 POT1Q9NUX5 634 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 ZNF337Q9Y3M9 751 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 ETV7Q9Y603 341 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 V9GY05 133 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 SZT2Q5T011 3432 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 CHD9Q3L8U1 2897 aa8.96□□□□□ -0.97
CD44-206ENST00000415148 TICRRQ7Z2Z1 1910 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 A0A087WUJ7 227 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 OR6C74A6NCV1 312 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 POM121BA6NF01 834 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 C2orf74A8MZ97 194 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 MCIDASD6RGH6 385 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 ATP6V1G2-DDX39BF2Z307 99 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 PIN1P1O15428 100 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 ADAM11O75078 769 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 GLCEO94923 617 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 IFNGR1P15260 489 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 SPI1P17947 270 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 S1PR1P21453 382 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 NAA10P41227 235 aaPredicted RBP8.96□□□□□ -0.98
CD44-206ENST00000415148 PRPS1P60891 318 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 PPP2CBP62714 309 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 PPP2CAP67775 309 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 OC90Q02509 493 aaPredicted RBP8.96□□□□□ -0.98
CD44-206ENST00000415148 PLA2G7Q13093 441 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 ITPRIPL2Q3MIP1 535 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 ZNF684Q5T5D7 378 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 OR5M10Q6IEU7 315 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 GLDNQ6ZMI3 551 aaPredicted RBP8.96□□□□□ -0.98
CD44-206ENST00000415148 ADGRG3Q86Y34 549 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 IQCF2Q8IXL9 164 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 TMEFF1Q8IYR6 380 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 HERVK_113Q902F9 699 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 OR1F2PQ96R84 312 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 GPX7Q96SL4 187 aaPredicted RBP8.96□□□□□ -0.98
CD44-206ENST00000415148 G6PC3Q9BUM1 346 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 SEMA4CQ9C0C4 833 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 GPN1Q9HCN4 374 aaPredicted RBP8.96□□□□□ -0.98
CD44-206ENST00000415148 TAS2R5Q9NYW4 299 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 HCN3Q9P1Z3 774 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 KIF25Q9UIL4 384 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 POMT2Q9UKY4 750 aa8.96□□□□□ -0.98
CD44-206ENST00000415148 MRPS2Q9Y399 296 aaKnown RBP8.96□□□□□ -0.98
CD44-206ENST00000415148 ARPC4-TTLL3A0A0A6YYG9 625 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 ZNF860A6NHJ4 632 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 C4orf47A7E2U8 309 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 SNRPGP15A8MWD9 76 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 NPIPB9F8W1W9 429 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 K7EQS6 105 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 SIX6O95475 246 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 FCER2P06734 321 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 CTRB1P17538 263 aa8.95□□□□□ -0.98
CD44-206ENST00000415148 MAPK3P27361 379 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms