RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 UGT1A4P22310 534 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 MAZP56270 477 aaKnown RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 CSNK1G2P78368 415 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ST3GAL3Q11203 375 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 GPR50Q13585 617 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 LINC00303Q3SY05 128 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SLC25A47Q6Q0C1 308 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 UNQ6126/PRO20091Q6UXV3 157 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 Q6ZVQ6 151 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ZNF720Q7Z2F6 126 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 MRGPRGQ86SM5 289 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 TRIM69Q86WT6 500 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SLC35F2Q8IXU6 374 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 DMBX1Q8NFW5 382 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 OR8K1Q8NGG5 319 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 OR5M1Q8NGP8 315 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 NR4A3Q92570 626 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 PINX1Q96BK5 328 aaKnown RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 HAVCR1Q96D42 359 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 RTP4Q96DX8 246 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 TSNARE1Q96NA8 513 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 NDUFAF3Q9BU61 184 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 CHID1Q9BWS9 393 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SLC2A6Q9UGQ3 507 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ENPP5Q9UJA9 477 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ANAPC7Q9UJX3 599 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 AGO1Q9UL18 857 aaKnown RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 NDRG2Q9UN36 371 aaKnown RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 LRRC42Q9Y546 428 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 PTPRZ1P23471 2315 aaPredicted RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 VCANP13611 3396 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 TMEM150BA6NC51 233 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 LILRA5A6NI73 299 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 RNF212BA8MTL3 300 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 LMO7DNF2Z398 122 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SIVA1O15304 175 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 NEFHP12036 1026 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 CD1CP29017 333 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 NDST2P52849 883 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 RPL24P83731 157 aaKnown RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 DHODHQ02127 395 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 DMC1Q14565 340 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SLC10A1Q14973 349 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 TRIM16LQ309B1 348 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 VWA2Q5GFL6 755 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SPANXN2Q5MJ10 180 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 BHLHB9Q6PI77 547 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 Q6ZS52 159 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 NDUFAF7Q7L592 441 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 FAM122BQ7Z309 247 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 GPALPP1Q8IXQ4 340 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ZNF114Q8NC26 417 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 OR8J2Q8NGG1 315 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 OR13F1Q8NGS4 319 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 CLHC1Q8NHS4 586 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.19□□□□□ -2.06
MCF2-204ENST00000414978 ST6GAL2Q96JF0 529 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 PRRG3Q9BZD7 231 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SEMA4CQ9C0C4 833 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 NARFLQ9H6Q4 476 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 WDR41Q9HAD4 459 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SIX2Q9NPC8 291 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ZNF302Q9NR11 478 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 PNO1Q9NRX1 252 aaKnown RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 PSMC3IPQ9P2W1 217 aaPredicted RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 GHRLQ9UBU3 117 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 PRODH2Q9UF12 536 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ADAM28Q9UKQ2 775 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ZNF490Q9ULM2 529 aaPredicted RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 TCF19Q9Y242 345 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 GSTK1Q9Y2Q3 226 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 PUS1Q9Y606 427 aaKnown RBP eCLIP2.19□□□□□ -2.06
MCF2-204ENST00000414978 FASNP49327 2511 aaKnown RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 NUP210LQ5VU65 1888 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SLC16A4O15374 487 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 PDE9AO76083 593 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SERPIND1P05546 499 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 FHP07954 510 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 BCKDHBP21953 392 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ATP5A1P25705 553 aaKnown RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 MATKP42679 507 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 KLK7P49862 253 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 CCNG1P51959 295 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SLC7A2P52569 658 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 TUBA1BP68363 451 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 GPR17Q13304 367 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 LY6DQ14210 128 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 RAB35Q15286 201 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 PSMD5Q16401 504 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 SYPL1Q16563 259 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 TMEM225Q6GV28 225 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 OR4F3Q6IEY1 312 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ZNF683Q8IZ20 524 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 OR52B6Q8NGF0 335 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 GPX8Q8TED1 209 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 LRRC39Q96DD0 335 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 DNAJA3Q96EY1 480 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ZNF48Q96MX3 618 aaPredicted RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 CATSPER2Q96P56 530 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 BEX2Q9BXY8 128 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms