RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 LIN52Q52LA3 116 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 RNF220Q5VTB9 566 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 PRAMEF8Q5VWM4 474 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 PRAMEF7Q5VXH5 474 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 UGT2A3Q6UWM9 527 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 RINLQ6ZS11 566 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 SPATA21Q7Z572 469 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 VRK2Q86Y07 508 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 MFSD8Q8NHS3 518 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 KIF18AQ8NI77 898 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 STK35Q8TDR2 534 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 CKAP2Q8WWK9 683 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 ZNF837Q96EG3 531 aaPredicted RBP10.49□□□□□ -0.73
LIMS2-210ENST00000413578 SORT1Q99523 831 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 NOX3Q9HBY0 568 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 SPEF1Q9Y4P9 236 aa10.49□□□□□ -0.73
LIMS2-210ENST00000413578 A0A096LPI6 279 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 CCDC154A6NI56 674 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 B4DSR2 109 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 SERPINE1P05121 402 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 ADRA2AP08913 450 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 ALDOCP09972 364 aaKnown RBP10.48□□□□□ -0.73
LIMS2-210ENST00000413578 PNMTP11086 282 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 PRG2P13727 222 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 IFNGR1P15260 489 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 EGR1P18146 543 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 PCMT1P22061 227 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 IL12AP29459 219 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 S100A3P33764 101 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 EVX1P49640 407 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 ELFN2Q5R3F8 820 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 OGFOD2Q6N063 350 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 CARM1Q86X55 608 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 PEX5LQ8IYB4 626 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 TMEM123Q8N131 208 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 KDM8Q8N371 416 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 CLIP4Q8N3C7 705 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 OR52P1PQ8NH57 321 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.48□□□□□ -0.732e-7■■■■■ 64.2
LIMS2-210ENST00000413578 PKNOX2Q96KN3 472 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 ZNF75AQ96N20 296 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 METTL17Q9H7H0 456 aaPredicted RBP10.48□□□□□ -0.73
LIMS2-210ENST00000413578 GPR35Q9HC97 309 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 B3GNT2Q9NY97 397 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 SEC14L4Q9UDX3 406 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.48□□□□□ -0.73
LIMS2-210ENST00000413578 RAP2CQ9Y3L5 183 aa10.48□□□□□ -0.73
LIMS2-210ENST00000413578 SH3PXD2BA1X283 911 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 VSTM5A8MXK1 200 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 FAM157AC9JC47 383 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 MYZAPP0CAP1 466 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 NR2F1P10589 423 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 LBPP18428 481 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 NR4A1P22736 598 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 ANXA11P50995 505 aaKnown RBP10.47□□□□□ -0.73
LIMS2-210ENST00000413578 CLDN17P56750 224 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 ABCE1P61221 599 aaKnown RBP10.47□□□□□ -0.73
LIMS2-210ENST00000413578 UFM1P61960 85 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 IL1RL1Q01638 556 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 SNTB2Q13425 540 aaKnown RBP10.47□□□□□ -0.73
LIMS2-210ENST00000413578 DAG1Q14118 895 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 CEACAM16Q2WEN9 425 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 ZNF627Q7L945 461 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 MDP1Q86V88 176 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 GLCCI1Q86VQ1 547 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 NUDCD3Q8IVD9 361 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 CCDC36Q8IYA8 594 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 CADM2Q8N3J6 435 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 TRIML2Q8N7C3 387 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 IL17RDQ8NFM7 739 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 CLDND2Q8NHS1 167 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 MRPL24Q96A35 216 aaKnown RBP10.47□□□□□ -0.73
LIMS2-210ENST00000413578 TMEM186Q96B77 213 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 PANX1Q96RD7 426 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 MRPL37Q9BZE1 423 aaKnown RBP10.47□□□□□ -0.73
LIMS2-210ENST00000413578 TPK1Q9H3S4 243 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 MEAF6Q9HAF1 191 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 CRLF2Q9HC73 371 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 DYNLRB1Q9NP97 96 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 SLC6A13Q9NSD5 602 aa10.47□□□□□ -0.73
LIMS2-210ENST00000413578 ZNF443Q9Y2A4 671 aaPredicted RBP10.47□□□□□ -0.73
LIMS2-210ENST00000413578 LOC102725191A0A1B0GVB3 256 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 TMEM89A2RUT3 159 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 ZNF99A8MXY4 864 aaPredicted RBP10.46□□□□□ -0.73
LIMS2-210ENST00000413578 WNT9BO14905 357 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 TRAF3IP2O43734 574 aaPredicted RBP10.46□□□□□ -0.73
LIMS2-210ENST00000413578 SYNGR3O43761 229 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 SLC43A1O75387 559 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 AHSA1O95433 338 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 HPXP02790 462 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 ZNF35P13682 527 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 ZNF43P17038 809 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 RPL14P50914 215 aaKnown RBP10.46□□□□□ -0.73
LIMS2-210ENST00000413578 ARFIP2P53365 341 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 COPZ1P61923 177 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 LRRC74AQ0VAA2 488 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 NPRL3Q12980 569 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 SLC9B1Q4ZJI4 515 aa10.46□□□□□ -0.73
LIMS2-210ENST00000413578 KRT80Q6KB66 452 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms