RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 KIR2DL5BA0A0G2JN68 375 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 KIR2DL5BA0A0G2JPC4 375 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 LOC100289279A0A1B0GTE1 492 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 MAN2B1O00754 1011 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 KDELR3O43731 214 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 MPZL2O60487 215 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SERPINA1P01009 418 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 TFP02787 698 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 HPXP02790 462 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ARAFP10398 606 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ETFAP13804 333 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 FABP4P15090 132 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 GLB1P16278 677 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ANOS1P23352 680 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 POLR2JP52435 117 aaKnown RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 ZNF235Q14590 738 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 AKR1C8PQ5T2L2 129 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SLC22A10Q63ZE4 541 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 PRICKLE2Q7Z3G6 844 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SPRED2Q7Z698 418 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SERPINA11Q86U17 422 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 KIR2DL5AQ8N109 375 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 PGBD5Q8N414 524 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 GPR26Q8NDV2 337 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 OR4A4PQ8NGN8 299 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 WDR89Q96FK6 387 aaPredicted RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 PYURFQ96I23 114 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 CITED1Q99966 193 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 NEUROD4Q9HD90 331 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 PNO1Q9NRX1 252 aaKnown RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 UQCC1Q9NVA1 299 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ASF1BQ9NVP2 202 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 C1orf109Q9NX04 203 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 MYOTQ9UBF9 498 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 MGAT4CQ9UBM8 478 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 MYLKQ15746 1914 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 IGLON5A6NGN9 336 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ZNF705EA8MWA4 302 aaPredicted RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 AMBPP02760 352 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 GPD1P21695 349 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 OTX1P32242 354 aaPredicted RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 MLF1P58340 268 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 MLLT11Q13015 90 aaPredicted RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 IDNKQ5T6J7 187 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 REEP3Q6NUK4 255 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 TEX38Q6PEX7 206 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ZNF730Q6ZMV8 503 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 TCF24Q7RTU0 167 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 CMTM1Q8IZ96 169 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ZFP41Q8N8Y5 198 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ACVR1CQ8NER5 493 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 MDGA1Q8NFP4 955 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 OR10A6Q8NH74 314 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 C11orf40Q8WZ69 217 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SPSB1Q96BD6 273 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ALG14Q96F25 216 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 GALNT14Q96FL9 552 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 PRAP1Q96NZ9 151 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 LPAR4Q99677 370 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ARL6Q9H0F7 186 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ANKRA2Q9H9E1 313 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SEC61A2Q9H9S3 476 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 PLEKHA2Q9HB19 425 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ZNF701Q9NV72 531 aaPredicted RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 WNT16Q9UBV4 365 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 RFNGQ9Y644 331 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ALPK3Q96L96 1907 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 FAM183AA6NL82 134 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 A8MVM7 634 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TPST2O60704 377 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 SIX3O95343 332 aaPredicted RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 ADH1BP00325 375 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2ABP04908 130 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 PPIAL4GP0DN37 164 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TFPIP10646 304 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CPN1P15169 458 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 HNRNPA2B1P22626 353 aaKnown RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 HTR2AP28223 471 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 FGF9P31371 208 aaPredicted RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 AKT1P31749 480 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ID1P41134 155 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TFPI2P48307 235 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ACLYP53396 1101 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ITGA1P56199 1179 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CTBP2P56545 445 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 QRICH1Q2TAL8 776 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 PRRT3Q5FWE3 981 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 CD200R1LQ6Q8B3 271 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 HIST3H2AQ7L7L0 130 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 MFSD6LQ8IWD5 586 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 C2CD4AQ8NCU7 369 aaPredicted RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 OR5L1Q8NGL2 311 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 PIGXQ8TBF5 258 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 TFGQ92734 400 aaPredicted RBP4.8□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2ACQ93077 130 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 ISOC2Q96AB3 205 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 MGLLQ99685 303 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 HIST1H2BLQ99880 126 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 SYT3Q9BQG1 590 aa4.8□□□□□ -1.64
HERC4-205ENST00000412272 WRAP53Q9BUR4 548 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms