RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 HYAL1Q12794 435 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 GAB1Q13480 694 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PRSS8Q16651 343 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ANGEL2Q5VTE6 544 aaKnown RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 HHIPL2Q6UWX4 724 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 FAM26EQ8N5C1 309 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 DTWD1Q8N5C7 304 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SLC38A9Q8NBW4 561 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM163Q8TC26 289 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 MUCL1Q96DR8 90 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SLC39A13Q96H72 371 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TOLLIPQ9H0E2 274 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 GPRC5CQ9NQ84 441 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 VSTM2BA6NLU5 285 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 H7BY64 318 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 DNASE2O00115 360 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 LDB2O43679 373 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PROSCO94903 275 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 C6orf47O95873 294 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CYC1P08574 325 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 C5AR1P21730 350 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 HTR1DP28221 377 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CLDN6P56747 220 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OR8B8Q15620 311 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 IGFBP7Q16270 282 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 DOK3Q7L591 496 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PIGZQ86VD9 579 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 GKN2Q86XP6 184 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SIRT2Q8IXJ6 389 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 KIR3DL3Q8N743 410 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 FRMD1Q8N878 549 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CHDHQ8NE62 594 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ZDHHC16Q969W1 377 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PARLQ9H300 379 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RIMS4Q9H426 269 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ACOT13Q9NPJ3 140 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 NXT2Q9NPJ8 142 aaKnown RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 HEYLQ9NQ87 328 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CA10Q9NS85 328 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 NUMBLQ9Y6R0 609 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 DUXBA0A1W2PPF3 345 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CDHR4A6H8M9 788 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 USP17L10C9JJH3 530 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PI15O43692 258 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 JMJD7P0C870 316 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 NAGAP17050 411 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SPI1P17947 270 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 AQP1P29972 269 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OR2B8PP59922 312 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PLAURQ03405 335 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SRYQ05066 204 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ZP2Q05996 745 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 MGAT2Q10469 447 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SLC36A1Q7Z2H8 476 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CEACAM19Q7Z692 300 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OR2T35Q8NGX2 323 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ZNF417Q8TAU3 575 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 FAM84AQ96KN4 292 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PRAP1Q96NZ9 151 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RNF2Q99496 336 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 GABARAPL3Q9BY60 117 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 EGLN1Q9GZT9 426 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 UNC93B1Q9H1C4 597 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 GAL3ST2Q9H3Q3 398 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ZNF552Q9H707 407 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 BEX1Q9HBH7 125 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 DCAF13Q9NV06 445 aaKnown RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 KIAA1522Q9P206 1035 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 FZD10Q9ULW2 581 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CNTNAP5Q8WYK1 1306 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 FAM135AQ9P2D6 1515 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ZNF320A2RRD8 509 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RFPL4AA6NLU0 287 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RFPL4AL1F8VTS6 287 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CORTO00230 105 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CCSO14618 274 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TRGC2P03986 189 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 FCGR3AP08637 254 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 EPXP11678 715 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 GABRR1P24046 479 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 MEOX2P50222 304 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CLCN3P51790 818 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CTSCP53634 463 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 P2RX3P56373 397 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RIPPLY3P57055 190 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RPS23P62266 143 aaKnown RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RRN3P1Q2M238 152 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TRAT1Q6PIZ9 186 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CELF5Q8N6W0 485 aaKnown RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CLEC1AQ8NC01 280 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ERGIC1Q969X5 290 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM230Q96A57 120 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 R3HDM4Q96D70 268 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SHDQ96IW2 340 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CXorf58Q96LI9 332 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ZNF317Q96PQ6 595 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ABHD6Q9BV23 337 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SNX11Q9Y5W9 270 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PLEKHG1Q9ULL1 1385 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 LOC107984156A0A0G2JMH3 177 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms