RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ABHD4Q8TB40 342 aa12.36□□□□□ -0.43
LIMS1-205ENST00000410093 SNX33Q8WV41 574 aa12.36□□□□□ -0.43
LIMS1-205ENST00000410093 SNRNP27Q8WVK2 155 aaKnown RBP12.36□□□□□ -0.43
LIMS1-205ENST00000410093 TTC9Q92623 222 aa12.36□□□□□ -0.43
LIMS1-205ENST00000410093 SMIM19Q96E16 107 aa12.36□□□□□ -0.43
LIMS1-205ENST00000410093 SDHCQ99643 169 aaPredicted RBP12.36□□□□□ -0.43
LIMS1-205ENST00000410093 ATF6BQ99941 703 aa12.36□□□□□ -0.43
LIMS1-205ENST00000410093 GTPBP2Q9BX10 602 aaKnown RBP12.36□□□□□ -0.43
LIMS1-205ENST00000410093 SLC26A1Q9H2B4 701 aa12.36□□□□□ -0.43
LIMS1-205ENST00000410093 LRRN3Q9H3W5 708 aa12.36□□□□□ -0.43
LIMS1-205ENST00000410093 GRHPRQ9UBQ7 328 aa12.36□□□□□ -0.43
LIMS1-205ENST00000410093 MED19A0JLT2 244 aaPredicted RBP12.35□□□□□ -0.43
LIMS1-205ENST00000410093 VSTM2BA6NLU5 285 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 FADS1O60427 444 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 TMCC2O75069 709 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 RENP00797 406 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 GTF2E2P29084 291 aaKnown RBP12.35□□□□□ -0.43
LIMS1-205ENST00000410093 EVI2BP34910 448 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 SIRPAP78324 504 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 ASAH1Q13510 395 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 IL11RAQ14626 422 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 C1orf189Q5VU69 101 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 CBLN3Q6UW01 205 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 SLC16A9Q7RTY1 509 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 LRRC17Q8N6Y2 441 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 FAM83FQ8NEG4 500 aaPredicted RBP12.35□□□□□ -0.43
LIMS1-205ENST00000410093 ST8SIA1Q92185 356 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 THRSPQ92748 146 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 TXNDC15Q96J42 360 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 CMTM3Q96MX0 182 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 LMF1Q96S06 567 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 SOSTQ9BQB4 213 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 MRI1Q9BV20 369 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 MIXL1Q9H2W2 232 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 NXT1Q9UKK6 140 aaKnown RBP12.35□□□□□ -0.43
LIMS1-205ENST00000410093 ZMIZ1Q9ULJ6 1067 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 TMEM14AQ9Y6G1 99 aa12.35□□□□□ -0.43
LIMS1-205ENST00000410093 ARID1BQ8NFD5 2236 aaPredicted RBP12.35□□□□□ -0.43
LIMS1-205ENST00000410093 DNAH14Q0VDD8 3507 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 A8MVM7 634 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 BLOC1S5-TXNDC5H3BN57 136 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 GNB5O14775 395 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 ALOX12BO75342 701 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 SCRG1O75711 98 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 HLA-DQB1P01920 261 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 IL7P13232 177 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 ITPKBP27987 946 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 MSX1P28360 303 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 EVX1P49640 407 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 TMED10P49755 219 aaKnown RBP12.34□□□□□ -0.43
LIMS1-205ENST00000410093 CTXN1P60606 82 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 EGR4Q05215 589 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 C17orf67Q0P5P2 114 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 CDK5R1Q15078 307 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 ZNF79Q15937 498 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 HLA-BQ31612 363 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 HACD4Q5VWC8 232 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 FCRLBQ6BAA4 426 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 LEG1Q6P5S2 330 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 ARL9Q6T311 187 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 ZNF574Q6ZN55 896 aaPredicted RBP12.34□□□□□ -0.43
LIMS1-205ENST00000410093 ANKRD37Q7Z713 158 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 LRRC28Q86X40 367 aaPredicted RBP12.34□□□□□ -0.43
LIMS1-205ENST00000410093 SNX29P2Q8IUI4 249 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 GATSQ8NAP1 163 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 SYT14Q8NB59 555 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 MOSPD2Q8NHP6 518 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 RPS4Y2Q8TD47 263 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 THAP4Q8WY91 577 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 TBX5Q99593 518 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 SLC22A4Q9H015 551 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 RERGLQ9H628 205 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 ST6GALNAC2Q9UJ37 374 aa12.34□□□□□ -0.43
LIMS1-205ENST00000410093 EXPH5Q8NEV8 1989 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 IGHV5-10-1A0A0J9YXX1 117 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 ZC3H12DA2A288 527 aaKnown RBP12.33□□□□□ -0.44
LIMS1-205ENST00000410093 CPED1A4D0V7 1026 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 OR6C68A6NDL8 312 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 CD8B2A6NJW9 211 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 ZNF879B4DU55 563 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 OIP5O43482 229 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 SIGLEC6O43699 453 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 CER1O95813 267 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 MRPL3P09001 348 aaKnown RBP12.33□□□□□ -0.44
LIMS1-205ENST00000410093 CLEC2LP0C7M8 214 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 CLUP10909 449 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 CD8BP10966 210 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 PYCR1P32322 319 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 TALDO1P37837 337 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 AQP2P41181 271 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 OR12D2P58182 307 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 ERVK-25P63136 954 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 CCL7P80098 99 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 SGCBQ16585 318 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 FAM69AQ5T7M9 428 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 GUSBP11Q6P575 273 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 CCBE1Q6UXH8 406 aaPredicted RBP12.33□□□□□ -0.44
LIMS1-205ENST00000410093 CEACAM19Q7Z692 300 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 PPP1R3BQ86XI6 285 aa12.33□□□□□ -0.44
LIMS1-205ENST00000410093 CADM3Q8N126 398 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms