RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 VWA2Q5GFL6 755 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 C19orf48Q6RUI8 117 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 SPESP1Q6UW49 350 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 GDPD4Q6W3E5 623 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 C9orf47Q6ZRZ4 202 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 PID1Q7Z2X4 250 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 LRRC8AQ8IWT6 810 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 MYOCDQ8IZQ8 938 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 OR1S2Q8NGQ3 325 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 OR2T6Q8NHC8 308 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 LYPD6BQ8NI32 183 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 PYROXD1Q8WU10 500 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 ANP32BQ92688 251 aaKnown RBP4.02□□□□□ -1.77
LSM5-205ENST00000409952 SEC22AQ96IW7 307 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 C9orf85Q96MD7 179 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 TBX15Q96SF7 602 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 RBM4BQ9BQ04 359 aaKnown RBP4.02□□□□□ -1.77
LSM5-205ENST00000409952 GOLPH3Q9H4A6 298 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 C6orf106Q9H6K1 298 aaPredicted RBP4.02□□□□□ -1.77
LSM5-205ENST00000409952 PRSS16Q9NQE7 514 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 ZNF275Q9NSD4 429 aaPredicted RBP4.02□□□□□ -1.77
LSM5-205ENST00000409952 B3GNT2Q9NY97 397 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 ABCD2Q9UBJ2 740 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 SLC2A6Q9UGQ3 507 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 ATP6V1DQ9Y5K8 247 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 AKNAQ7Z591 1439 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 TRGV8A0A0C4DH27 118 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 LOC100131303A0A0U1RQF7 123 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 TRPC5OSA6NMA1 111 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 CENPXA8MT69 81 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 DYNC1I1O14576 645 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 ERLIN2O94905 339 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 FGF1P05230 155 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 NQO2P16083 231 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 IDSP22304 550 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 PRKACGP22612 351 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 IL12BP29460 328 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 MAP2K2P36507 400 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 RGRP47804 291 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 SLC26A2P50443 739 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 GPX6P59796 221 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 UBE2IP63279 158 aaKnown RBP4.01□□□□□ -1.77
LSM5-205ENST00000409952 C14orf28Q4W4Y0 310 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 NADSYN1Q6IA69 706 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 Q6ZRP5 223 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 Q6ZSR9 355 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 SLC26A9Q7LBE3 791 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 ARCQ7LC44 396 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 CMTM1Q8IZ96 169 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 SVOPLQ8N434 492 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 LIX1Q8N485 282 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 OR56A4Q8NGH8 313 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 OR10V1Q8NGI7 309 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 OR4D6Q8NGJ1 314 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 CCDC124Q96CT7 223 aaKnown RBP4.01□□□□□ -1.77
LSM5-205ENST00000409952 MED30Q96HR3 178 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 FAM210AQ96ND0 272 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 MCHR1Q99705 422 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 LZTS2Q9BRK4 669 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 FAIM2Q9BWQ8 316 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 TM2D1Q9BX74 207 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 CLEC7AQ9BXN2 247 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 TMEM59Q9BXS4 323 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 DGCR6LQ9BY27 220 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 KRTAP1-5Q9BYS1 174 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 ZYG11BQ9C0D3 744 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 GBA3Q9H227 469 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 PIGUQ9H490 435 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 MTRF1LQ9UGC7 380 aaKnown RBP4.01□□□□□ -1.77
LSM5-205ENST00000409952 ENPP5Q9UJA9 477 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 RIMS3Q9UJD0 308 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 DDX19BQ9UMR2 479 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 L3MBTL1Q9Y468 752 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 CPQQ9Y646 472 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 KIAA1210Q9ULL0 1709 aa4.01□□□□□ -1.77
LSM5-205ENST00000409952 IGHV3OR16-12A0A075B7B8 117 aa4□□□□□ -1.77
LSM5-205ENST00000409952 TEX48A0A1B0GUV7 120 aa4□□□□□ -1.77
LSM5-205ENST00000409952 MYMKA6NI61 221 aa4□□□□□ -1.77
LSM5-205ENST00000409952 BLOC1S5-TXNDC5H3BN57 136 aa4□□□□□ -1.77
LSM5-205ENST00000409952 RFXANKO14593 260 aa4□□□□□ -1.77
LSM5-205ENST00000409952 PPP1R2P9O14990 202 aa4□□□□□ -1.77
LSM5-205ENST00000409952 CALUO43852 315 aaPredicted RBP4□□□□□ -1.77
LSM5-205ENST00000409952 GMDSO60547 372 aa4□□□□□ -1.77
LSM5-205ENST00000409952 UGT1A9O60656 530 aa4□□□□□ -1.77
LSM5-205ENST00000409952 CLDN1O95832 211 aa4□□□□□ -1.77
LSM5-205ENST00000409952 CD48P09326 243 aa4□□□□□ -1.77
LSM5-205ENST00000409952 H2AFZP0C0S5 128 aa4□□□□□ -1.77
LSM5-205ENST00000409952 IL32P24001 234 aa4□□□□□ -1.77
LSM5-205ENST00000409952 CALCRP30988 508 aa4□□□□□ -1.77
LSM5-205ENST00000409952 SLC26A3P40879 764 aa4□□□□□ -1.77
LSM5-205ENST00000409952 GPR1P46091 355 aa4□□□□□ -1.77
LSM5-205ENST00000409952 CRISP1P54107 249 aa4□□□□□ -1.77
LSM5-205ENST00000409952 PLTPP55058 493 aa4□□□□□ -1.77
LSM5-205ENST00000409952 MRPS11P82912 194 aaKnown RBP4□□□□□ -1.77
LSM5-205ENST00000409952 ZNF33AQ06730 810 aa4□□□□□ -1.77
LSM5-205ENST00000409952 ART3Q13508 389 aa4□□□□□ -1.77
LSM5-205ENST00000409952 KCNJ11Q14654 390 aa4□□□□□ -1.77
LSM5-205ENST00000409952 SF3A2Q15428 464 aaKnown RBP4□□□□□ -1.77
LSM5-205ENST00000409952 SAMD4BQ5PRF9 694 aaKnown RBP4□□□□□ -1.77
LSM5-205ENST00000409952 OR2G6Q5TZ20 316 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms