RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 MBD6Q96DN6 1003 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 CNRIP1Q96F85 164 aaPredicted RBP2.82□□□□□ -1.96
RGPD3-202ENST00000409886 C7orf50Q9BRJ6 194 aaKnown RBP2.82□□□□□ -1.96
RGPD3-202ENST00000409886 MENTQ9BUN1 341 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 PITHD1Q9GZP4 211 aaPredicted RBP2.82□□□□□ -1.96
RGPD3-202ENST00000409886 MARK1Q9P0L2 795 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 EDARQ9UNE0 448 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 AK6Q9Y3D8 172 aaKnown RBP2.82□□□□□ -1.96
RGPD3-202ENST00000409886 KCNE2Q9Y6J6 123 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 MEIKINA0A087WXM9 373 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 H0Y8X5 98 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 HRKO00198 91 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 EREGO14944 169 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 NUPR1O60356 82 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 OLFM2O95897 454 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 PNPP00491 289 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 RCC1P18754 421 aaPredicted RBP2.82□□□□□ -1.96
RGPD3-202ENST00000409886 HLA-DMAP28067 261 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 ZNF136P52737 540 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 EPHA4P54764 986 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 OR2B8PP59922 312 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 GTF2H2Q13888 395 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 CHRNA6Q15825 494 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 MARC1Q5VT66 337 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 C12orf73Q69YU5 71 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 KIAA1161Q6NSJ0 714 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 GTF2H2CQ6P1K8 395 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 FIGNL1Q6PIW4 674 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 PLCZ1Q86YW0 608 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 ATPAF2Q8N5M1 289 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 BPIFCQ8NFQ6 507 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 OR4K5Q8NGD3 323 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 OR51F2Q8NH61 342 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 RXFP4Q8TDU9 374 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 PMM1Q92871 262 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 LRFN5Q96NI6 719 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 FOXN4Q96NZ1 517 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 RIOK2Q9BVS4 552 aaKnown RBP2.82□□□□□ -1.96
RGPD3-202ENST00000409886 PARD6GQ9BYG4 376 aaPredicted RBP2.82□□□□□ -1.96
RGPD3-202ENST00000409886 NIT2Q9NQR4 276 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 MGAT4CQ9UBM8 478 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 EXTL2Q9UBQ6 330 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 MAGEL2Q9UJ55 1249 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 SATB2Q9UPW6 733 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 NCKAP1Q9Y2A7 1128 aa2.82□□□□□ -1.96
RGPD3-202ENST00000409886 LOC101059948A0A1B0GTJ6 334 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 C5orf52A6NGY3 159 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 NEDD8-MDP1E9PL57 170 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 SLCO1B7G3V0H7 640 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 GABRPO00591 440 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 ULK1O75385 1050 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 MTRF1O75570 445 aaKnown RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 SLC25A14O95258 325 aaPredicted RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 IMPA1P29218 277 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 DNAJA1P31689 397 aaKnown RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 SLC1A3P43003 542 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 MAPK9P45984 424 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 ARRB1P49407 418 aaPredicted RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 CCR8P51685 355 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 RIDAP52758 137 aaKnown RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 ERVK-25P63136 954 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 UBE2IP63279 158 aaKnown RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 KLF9Q13886 244 aaPredicted RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 ARHGEF7Q14155 803 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 OPCMLQ14982 345 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 UPP1Q16831 310 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 ZNF311Q5JNZ3 666 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 CRTC1Q6UUV9 634 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 SLC36A1Q7Z2H8 476 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 PROKR2Q8NFJ6 384 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 TOR1AIP2Q8NFQ8 470 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 OR4S1Q8NGB4 309 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 MOSPD2Q8NHP6 518 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 NEIL3Q8TAT5 605 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 ZNF431Q8TF32 576 aaPredicted RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 ZDHHC1Q8WTX9 485 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 THAP7Q9BT49 309 aaPredicted RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 FSD1LQ9BXM9 530 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 GABARAPL1Q9H0R8 117 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 NT5DC2Q9H857 520 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 SEC14L4Q9UDX3 406 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 KLHDC2Q9Y2U9 406 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 DHRS7Q9Y394 339 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 RHBDD3Q9Y3P4 386 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 TGP01266 2768 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 A0A1W2PQF6 199 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 CCDC182A6NF36 153 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 CPSF4LA6NMK7 179 aaKnown RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 PLPP1O14494 284 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 PDCD5O14737 125 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 SPINT1O43278 529 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 VPS26AO75436 327 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 CPSF4O95639 269 aaKnown RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 NPSP0C0P6 89 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 CCNCP24863 283 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 PCSK1P29120 753 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 PPP2R1BP30154 601 aa2.81□□□□□ -1.96
RGPD3-202ENST00000409886 FGF9P31371 208 aaPredicted RBP2.81□□□□□ -1.96
RGPD3-202ENST00000409886 S100A5P33763 92 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms