RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 OR9Q1Q8NGQ5 310 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 MFSD8Q8NHS3 518 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 ISOC1Q96CN7 298 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 SIGLEC12Q96PQ1 595 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 ASPNQ9BXN1 380 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 NDEL1Q9GZM8 345 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 OR51V1Q9H2C8 321 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 FGF20Q9NP95 211 aaPredicted RBP12.67□□□□□ -0.38
GPNMB-203ENST00000409458 SERINC1Q9NRX5 453 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 ABI3Q9P2A4 366 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 MED13Q9UHV7 2174 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 IRGMA1A4Y4 181 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 DCDC2BA2VCK2 349 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 PINLYPA6NC86 204 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 PLPP3O14495 311 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 IDH3BO43837 385 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 WDPCPO95876 746 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 TXNDC12O95881 172 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 OPN1LWP04000 364 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 GYPBP06028 91 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 APEHP13798 732 aaKnown RBP12.67□□□□□ -0.38
GPNMB-203ENST00000409458 PAICSP22234 425 aaKnown RBP12.67□□□□□ -0.38
GPNMB-203ENST00000409458 SDHAP31040 664 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 IDUAP35475 653 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 MAP2K6P52564 334 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 B3GNT6Q6ZMB0 384 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 MEPCEQ7L2J0 689 aaKnown RBP12.67□□□□□ -0.38
GPNMB-203ENST00000409458 NPEPL1Q8NDH3 523 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 OR4F15Q8NGB8 312 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 THAP4Q8WY91 577 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 NXPE2Q96DL1 559 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 OR5M11Q96RB7 305 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 NMNAT3Q96T66 252 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 UTP23Q9BRU9 249 aaKnown RBP12.67□□□□□ -0.38
GPNMB-203ENST00000409458 POTEKPQ9BYX7 375 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 MRPL39Q9NYK5 338 aaKnown RBP12.67□□□□□ -0.38
GPNMB-203ENST00000409458 PLA2G3Q9NZ20 509 aa12.67□□□□□ -0.38
GPNMB-203ENST00000409458 WARS2Q9UGM6 360 aaKnown RBP12.67□□□□□ -0.38
GPNMB-203ENST00000409458 EXOGQ9Y2C4 368 aaKnown RBP12.67□□□□□ -0.38
GPNMB-203ENST00000409458 SPIN1Q9Y657 262 aaPredicted RBP12.67□□□□□ -0.38
GPNMB-203ENST00000409458 TRABD2BA6NFA1 517 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 LIPT2A6NK58 231 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 A6NL46 340 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 ZIC3O60481 467 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 CBR3O75828 277 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 PLGP00747 810 aaPredicted RBP12.66□□□□□ -0.38
GPNMB-203ENST00000409458 ETV1P50549 477 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 RPS7P62081 194 aaKnown RBP12.66□□□□□ -0.38
GPNMB-203ENST00000409458 MYBPHQ13203 477 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 OR1C1Q15619 314 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.38
GPNMB-203ENST00000409458 TBC1D25Q3MII6 688 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 GLYR1Q49A26 553 aaPredicted RBP12.66□□□□□ -0.38
GPNMB-203ENST00000409458 MESTQ5EB52 335 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 RAET1LQ5VY80 246 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 RNLSQ5VYX0 342 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 LEG1Q6P5S2 330 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 ZNF367Q7RTV3 350 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 NMD3Q96D46 503 aaKnown RBP12.66□□□□□ -0.38
GPNMB-203ENST00000409458 CRELD1Q96HD1 420 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 DDOQ99489 341 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 FUNDC2Q9BWH2 189 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 HES7Q9BYE0 225 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 TIMMDC1Q9NPL8 285 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 ALKBH4Q9NXW9 302 aa12.66□□□□□ -0.38
GPNMB-203ENST00000409458 LSM2Q9Y333 95 aaKnown RBP12.66□□□□□ -0.38
GPNMB-203ENST00000409458 OR6C68A6NDL8 312 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 RNF13O43567 381 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 FZD7O75084 574 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 RFPL3SP0C7P2 107 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 ZNF17P17021 662 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 CNR1P21554 472 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 AHCYP23526 432 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 GTF2E2P29084 291 aaKnown RBP12.65□□□□□ -0.38
GPNMB-203ENST00000409458 GSTT1P30711 240 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 SFTPDP35247 375 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 TGFBR2P37173 567 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 CDKN2AP42771 156 aaKnown RBP12.65□□□□□ -0.38
GPNMB-203ENST00000409458 SLC16A1P53985 500 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 RRADP55042 308 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 KRR1Q13601 381 aaKnown RBP12.65□□□□□ -0.38
GPNMB-203ENST00000409458 TIGD6Q17RP2 521 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 JAZF1Q86VZ6 243 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 SCAIQ8N9R8 606 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 OR51G2Q8NGK0 314 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 ZNF420Q8TAQ5 688 aaPredicted RBP12.65□□□□□ -0.38
GPNMB-203ENST00000409458 SLC39A7Q92504 469 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 YIPF6Q96EC8 236 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 OR5B2Q96R09 309 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 YIPF3Q9GZM5 350 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 INIPQ9NRY2 104 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 GRHPRQ9UBQ7 328 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 KLK13Q9UKR3 277 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 ZNF346Q9UL40 294 aaKnown RBP12.65□□□□□ -0.38
GPNMB-203ENST00000409458 ERGIC3Q9Y282 383 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 CORINQ9Y5Q5 1042 aa12.65□□□□□ -0.38
GPNMB-203ENST00000409458 A0A1W2PNR3 127 aa12.64□□□□□ -0.39
GPNMB-203ENST00000409458 OR2M5A3KFT3 312 aa12.64□□□□□ -0.39
GPNMB-203ENST00000409458 SLC22A31A6NKX4 558 aa12.64□□□□□ -0.39
GPNMB-203ENST00000409458 J3QRE1 110 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms