RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 SMAD2Q15796 467 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM176BQ3YBM2 270 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 Q499Y3 187 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SCGB2B2Q4G0G5 96 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 RNASE10Q5GAN6 216 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 HES5Q5TA89 166 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 VASNQ6EMK4 673 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 RTL6Q6ICC9 239 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 EIF5AL1Q6IS14 154 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 NIPAL3Q6P499 406 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 C6orf15Q6UXA7 325 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TMPPEQ6ZT21 453 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ESX1Q8N693 406 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GALNT6Q8NCL4 622 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GPR32P1Q8NGA4 272 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 OR5D14Q8NGL3 314 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 YIPF6Q96EC8 236 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 NMNAT3Q96T66 252 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GDF15Q99988 308 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 UTP23Q9BRU9 249 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM43Q9BTV4 400 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 BCL2L14Q9BZR8 327 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 HINT3Q9NQE9 182 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 MBD2Q9UBB5 411 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 EIF3KQ9UBQ5 218 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF69Q9UC07 566 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 RASD1Q9Y272 281 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GON4LQ3T8J9 2241 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 A0A087WZY1 265 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM269A0A1B0GVZ9 245 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CIB4A0PJX0 185 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM72A0PK05 275 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CPEP16870 476 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 NAT1P18440 290 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GDF1P27539 372 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SDHAP31040 664 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GZMMP51124 257 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 AKR1D1P51857 326 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ARHGDIBP52566 201 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 RAB2AP61019 212 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 YBX1P67809 324 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GALK2Q01415 458 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 DMWDQ09019 674 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SCRN3Q0VDG4 424 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 PRICKLE4Q2TBC4 344 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC35D2Q76EJ3 337 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 UBE3DQ7Z6J8 389 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 PHC2Q8IXK0 858 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 AMER3Q8N944 861 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 PFN4Q8NHR9 129 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 MAFAQ8NHW3 353 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 THAP6Q8TBB0 222 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GHSRQ92847 366 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TSLPQ969D9 159 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 DNAJA3Q96EY1 480 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 DHRS1Q96LJ7 313 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 PSD2Q9BQI7 771 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CENPOQ9BU64 300 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ULBP2Q9BZM5 246 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 NXF5Q9H1B4 397 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 S1PR5Q9H228 398 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 MED20Q9H944 212 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ERVMER34-1Q9H9K5 563 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 C12orf10Q9HB07 376 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ATP13A2Q9NQ11 1180 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SLAMF7Q9NQ25 335 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 RYDENQ9NUL5 291 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 NDUFB11Q9NX14 153 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 IL20Q9NYY1 176 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CHRNA9Q9UGM1 479 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 RPH3AQ9Y2J0 694 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ETV7Q9Y603 341 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TRAV18A0A075B6X5 111 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 C5orf51A6NDU8 294 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 KDM4EB2RXH2 506 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF593O00488 134 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CTDSP2O14595 271 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SURF4O15260 269 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CREBL2O60519 120 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF254O75437 659 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 RAD51DO75771 328 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CAPNS1P04632 268 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ZGLP1P0C6A0 271 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 OR8G3PP0DMU2 310 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 BMP4P12644 408 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TBXA2RP21731 343 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 EPHA8P29322 1005 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ADH7P40394 386 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 UBE2NP61088 152 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 HERV-K104P61576 105 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 PUDPQ08623 228 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ALKBH1Q13686 389 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 IL11RAQ14626 422 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF141Q15928 474 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM201Q5SNT2 666 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 COL13A1Q5TAT6 717 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ANKRD34AQ69YU3 496 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 C3orf33Q6P1S2 294 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 BTN2A1Q7KYR7 527 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms