RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 ACSF3Q4G176 576 aaPredicted RBP11□□□□□ -0.65
LINC00339-201ENST00000404210 C1orf185Q5T7R7 199 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 LPCAT4Q643R3 524 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 ANKRD34AQ69YU3 496 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 RTL6Q6ICC9 239 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 RPL13AP3Q6NVV1 102 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 KLHL17Q6TDP4 642 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 NANOGNBQ7Z5D8 188 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 PXKQ7Z7A4 578 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 CCDC103Q8IW40 242 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 CBR4Q8N4T8 237 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 PACRGLQ8N7B6 248 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 CLDN22Q8N7P3 220 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 LRRC75AQ8NAA5 344 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 GALNT11Q8NCW6 608 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 OR13C2Q8NGS9 318 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 MAGEE2Q8TD90 523 aaPredicted RBP11□□□□□ -0.65
LINC00339-201ENST00000404210 WNT2BQ93097 391 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 TRIB1Q96RU8 372 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 RNF122Q9H9V4 155 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 PAPOLBQ9NRJ5 636 aaKnown RBP11□□□□□ -0.65
LINC00339-201ENST00000404210 GLRX2Q9NS18 164 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 KIF17Q9P2E2 1029 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 REV1Q9UBZ9 1251 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 ARHGAP21Q5T5U3 1957 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 TRAV27A0A087WT01 109 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 IGHV3-15A0A0B4J1V0 119 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 A0A1W2PNV4 684 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF814B7Z6K7 855 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 EI24O14681 340 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 C1QL1O75973 258 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 NDUFB2O95178 105 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 TGM6O95932 706 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 TP53P04637 393 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-201ENST00000404210 ALPLP05186 524 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 FCGR2AP12318 317 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF26P17031 533 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-201ENST00000404210 TIMP3P35625 211 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 AQP2P41181 271 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 CASP6P55212 293 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 TLE1Q04724 770 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 RPL18Q07020 188 aaKnown RBP10.99□□□□□ -0.65
LINC00339-201ENST00000404210 PUDPQ08623 228 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 RASGEF1BQ0VAM2 473 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 SLC17A1Q14916 467 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 RNPS1Q15287 305 aaKnown RBP10.99□□□□□ -0.65
LINC00339-201ENST00000404210 POU4F3Q15319 338 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 ABLIM2Q6H8Q1 611 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 SMARCD3Q6STE5 483 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 NHLRC1Q6VVB1 395 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 P4HA3Q7Z4N8 544 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 PARP8Q8N3A8 854 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 FNDC9Q8TBE3 224 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 RNF128Q8TEB7 428 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 TM9SF2Q99805 663 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 NDEL1Q9GZM8 345 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 OR52D1Q9H346 318 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 MCCC2Q9HCC0 563 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 GP6Q9HCN6 339 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 KRT84Q9NSB2 600 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 KLHL9Q9P2J3 617 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 SEC14L4Q9UDX3 406 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 ENOPH1Q9UHY7 261 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 TMEFF2Q9UIK5 374 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-201ENST00000404210 FAM215AQ9Y5M1 114 aa10.99□□□□□ -0.65
LINC00339-201ENST00000404210 ATRXP46100 2492 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 IGKV3D-15A0A087WSY6 115 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 MBD3L4A6NDZ8 208 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-201ENST00000404210 MBD3L3A6NE82 208 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-201ENST00000404210 MBD3L5A6NJ08 208 aaPredicted RBP10.98□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF716A6NP11 495 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF724A8MTY0 619 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 RNF13O43567 381 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 RAMP1O60894 148 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 AQP8O94778 261 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 STSP08842 583 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF43P17038 809 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 KLK2P20151 261 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 AHCYP23526 432 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 IGFBP5P24593 272 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 PEX2P28328 305 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 CA7P43166 264 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 SLC16A1P53985 500 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 CRISP1P54107 249 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 RAD23AP54725 363 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 FXYD6P3P58550 94 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 CTXN1P60606 82 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 ESRRGP62508 458 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 LRRC36Q1X8D7 754 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 ALG10Q5BKT4 473 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 FBXW10Q5XX13 1052 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 TMEM211Q6ICI0 200 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 OR2A2Q6IF42 318 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 RPTNQ6XPR3 784 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 B3GNT6Q6ZMB0 384 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 DPY19L2P2Q6ZN68 376 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF620Q6ZNG0 422 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 KIF18BQ86Y91 864 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 UEVLDQ8IX04 471 aa10.98□□□□□ -0.65
LINC00339-201ENST00000404210 MCEMP1Q8IX19 187 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms