RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 OR4D11Q8NGI4 311 aa13.89□□□□□ -0.19
ATG4B-203ENST00000400772 OR6T1Q8NGN1 323 aa13.89□□□□□ -0.19
ATG4B-203ENST00000400772 ZNF417Q8TAU3 575 aa13.89□□□□□ -0.19
ATG4B-203ENST00000400772 TAMM41Q96BW9 452 aa13.89□□□□□ -0.19
ATG4B-203ENST00000400772 COX4I2Q96KJ9 171 aa13.89□□□□□ -0.19
ATG4B-203ENST00000400772 OXGR1Q96P68 337 aa13.89□□□□□ -0.19
ATG4B-203ENST00000400772 ZNF587Q96SQ5 575 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-203ENST00000400772 EVA1AQ9H8M9 152 aa13.89□□□□□ -0.19
ATG4B-203ENST00000400772 SLC13A4Q9UKG4 626 aa13.89□□□□□ -0.19
ATG4B-203ENST00000400772 M0R1B8 84 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 AIM2O14862 343 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 BGLAPP02818 100 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 THY1P04216 161 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 TROVE2P10155 538 aaKnown RBP eCLIP13.88□□□□□ -0.19
ATG4B-203ENST00000400772 HOXB4P17483 251 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-203ENST00000400772 CDH2P19022 906 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-203ENST00000400772 CD247P20963 164 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 PCGF2P35227 344 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 CDKN1AP38936 164 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 CDH11P55287 796 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 CLDN17P56750 224 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 NCALDP61601 193 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 TGFBR3Q03167 851 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 TRMT5Q32P41 509 aaKnown RBP13.88□□□□□ -0.19
ATG4B-203ENST00000400772 HIKESHIQ53FT3 197 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 KLHL17Q6TDP4 642 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 NHLRC1Q6VVB1 395 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 LINC00114Q6XXX2 140 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 B3GLCTQ6Y288 498 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 H1FNTQ75WM6 255 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-203ENST00000400772 DTX2Q86UW9 622 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 TSPYL5Q86VY4 417 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-203ENST00000400772 CALHM3Q86XJ0 350 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 RBM45Q8IUH3 476 aaKnown RBP13.88□□□□□ -0.19
ATG4B-203ENST00000400772 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-203ENST00000400772 OR6S1Q8NH40 331 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 LRRC58Q96CX6 371 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 SLC41A3Q96GZ6 507 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 RADILQ96JH8 1075 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 MCHR1Q99705 422 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 TRAF4Q9BUZ4 470 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-203ENST00000400772 LINC00470Q9BZP3 86 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 CCDC134Q9H6E4 229 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 MGAT4BQ9UQ53 548 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 B3GALT5Q9Y2C3 310 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 AMDHD2Q9Y303 409 aa13.88□□□□□ -0.19
ATG4B-203ENST00000400772 SETD2Q9BYW2 2564 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-203ENST00000400772 LOC102725191A0A1B0GVB3 256 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 FMO6PO60774 539 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 LYPD3O95274 346 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 HPRP00739 348 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 VIMP08670 466 aaKnown RBP13.87□□□□□ -0.19
ATG4B-203ENST00000400772 ZNF43P17038 809 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 PTNP21246 168 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 GTF2E2P29084 291 aaKnown RBP13.87□□□□□ -0.19
ATG4B-203ENST00000400772 CYLC2Q14093 348 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-203ENST00000400772 VMACQ2NL98 169 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 RABL3Q5HYI8 236 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 COQ5Q5HYK3 327 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 REP15Q6BDI9 236 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 Q71RC1 249 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-203ENST00000400772 CCDC80Q76M96 950 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 PATL1Q86TB9 770 aaKnown RBP13.87□□□□□ -0.19
ATG4B-203ENST00000400772 RANBP3LQ86VV4 465 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-203ENST00000400772 SLC30A8Q8IWU4 369 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 OR1K1Q8NGR3 316 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 RNF217Q8TC41 542 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 BCL2L2Q92843 193 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-203ENST00000400772 POM121Q96HA1 1249 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 MOGAT1Q96PD6 335 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 ALKBH3Q96Q83 286 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-203ENST00000400772 BDH2Q9BUT1 245 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 GRIP2Q9C0E4 1043 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 NELFAQ9H3P2 528 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 SELENONQ9NZV5 590 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 USP22Q9UPT9 525 aa13.87□□□□□ -0.19
ATG4B-203ENST00000400772 ALPK2Q86TB3 2170 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 LOC100653049A0A140TA62 436 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 OR6C65A6NJZ3 312 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 ZNF587BE7ETH6 402 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 LRRN3E7EW58 273 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 KRT33AO76009 404 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 KRT34O76011 436 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 HLA-DOBP13765 273 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 PRPS1P60891 318 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 TBRG1Q3YBR2 411 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 ENTPD8Q5MY95 495 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 SWT1Q5T5J6 900 aaKnown RBP13.86□□□□□ -0.19
ATG4B-203ENST00000400772 C1QTNF12Q5T7M4 302 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 ZNF613Q6PF04 617 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 SLC22A25Q6T423 547 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 WDR88Q6ZMY6 472 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 ABHD12BQ7Z5M8 362 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-203ENST00000400772 WDFY1Q8IWB7 410 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 ADPRHL1Q8NDY3 354 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 OR8J3Q8NGG0 315 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 DHRS9Q9BPW9 319 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 TMEM43Q9BTV4 400 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 RCE1Q9Y256 329 aa13.86□□□□□ -0.19
ATG4B-203ENST00000400772 CPSF4LA6NMK7 179 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms