RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 SLC16A1P53985 500 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 ISL1P61371 349 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 CSTF1Q05048 431 aaKnown RBP6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 RAB32Q13637 225 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 EXT1Q16394 746 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 AVPI1Q5T686 147 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 DET1Q7L5Y6 550 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF683Q8IZ20 524 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 TMEM156Q8N614 296 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 OR52B4Q8NGK2 314 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 PIH1D2Q8WWB5 315 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 ITCHQ96J02 903 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 TECTBQ96PL2 329 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 CHRDL1Q9BU40 450 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 AMBRA1Q9C0C7 1298 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 AKIP1Q9NQ31 210 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 DCAF13Q9NV06 445 aaKnown RBP6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 RDH8Q9NYR8 311 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 SLC23A1Q9UHI7 598 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 PADI3Q9ULW8 664 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 TTC3P53804 2025 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 SLC22A23A1A5C7 686 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 DUX1O43812 170 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 UGT2B17O75795 530 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 ATG12O94817 140 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF682O95780 498 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 PRSS56P0CW18 603 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 IL1RNP18510 177 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 AGXTP21549 392 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 HTR6P50406 440 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 MFAP4P55083 255 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 E2F1Q01094 437 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 RBPJQ06330 500 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 PIGFQ07326 219 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 CDK5R2Q13319 367 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 PXT1Q8NFP0 134 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 OR10K1Q8NGX5 313 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 PHF10Q8WUB8 498 aaKnown RBP6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 FCGR1BQ92637 280 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 FKBP10Q96AY3 582 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 PYURFQ96I23 114 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 TSSK3Q96PN8 268 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 DUX5Q96PT3 197 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 OR2V2Q96R30 315 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 MBOAT4Q96T53 435 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 CDX2Q99626 313 aaPredicted RBP6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 NDUFAF3Q9BU61 184 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 MTHFD2LQ9H903 347 aaPredicted RBP6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 RHCGQ9UBD6 479 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 RAI2Q9Y5P3 530 aa6.07□□□□□ -1.44
TM9SF4-202ENST00000398022 A0A1W2PQ45 241 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 A0A1W2PQY0 241 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 C5orf52A6NGY3 159 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 DISC1C4P0D8 188 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 KCNK2O95069 426 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 MED26O95402 600 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 RHOCP08134 193 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CD52P31358 61 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 PIGAP37287 484 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 PTGFRP43088 359 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 PGFP49763 221 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 KLF3P57682 345 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 LSM3P62310 102 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 EMX1Q04741 257 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF616Q08AN1 781 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ABHD18Q0P651 414 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 TRAF3Q13114 568 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 GK2Q14410 553 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 IL11RAQ14626 422 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 SHHQ15465 462 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 SMIM21Q3B7S5 101 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 TTLL9Q3SXZ7 439 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 RFTN2Q52LD8 501 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 SPANXN4Q5MJ08 99 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 PRAMEF8Q5VWM4 474 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 MBNL2Q5VZF2 373 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 RBPMS2Q6ZRY4 209 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CALHM1Q8IU99 346 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 KLHDC9Q8NEP7 349 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 MCFD2Q8NI22 146 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 NFKBIDQ8NI38 313 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 HRASLS5Q96KN8 279 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 LINC00052Q96N35 136 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 TRIB3Q96RU7 358 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CSF3RQ99062 836 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 TSNAXQ99598 290 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ORAI3Q9BRQ5 295 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 G6PC3Q9BUM1 346 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF426Q9BUY5 554 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 PRDM6Q9NQX0 595 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 OSGIN1Q9UJX0 560 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 DOCK4Q8N1I0 1966 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 PTPRZ1P23471 2315 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 A0A1W2PRU2 124 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 HEPACAM2A8MVW5 462 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 FFAR3O14843 346 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 GPR42O15529 346 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 XPNPEP2O43895 674 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 TXNDC12O95881 172 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 GTF2F2P13984 249 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms