RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ATCAYQ86WG3 371 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 RNF128Q8TEB7 428 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 WNT2BQ93097 391 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 UCK2Q9BZX2 261 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 RASD1Q9Y272 281 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 GSTM3P21266 225 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 AQP2P41181 271 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 ABLIM2Q6H8Q1 611 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 B3GNT6Q6ZMB0 384 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 MCEMP1Q8IX19 187 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 SLC43A2Q8N370 569 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 KDM8Q8N371 416 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 TAS2R5Q9NYW4 299 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 SIGLEC7Q9Y286 467 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 HIF3AQ9Y2N7 669 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 ARHGAP21Q5T5U3 1957 aa21.06■□□□□ 0.96
TSPAN4-203ENST00000397397 C11orf98E9PRG8 122 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 MS4A18H0YCH9 400 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 PTP4A3O75365 173 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 GNLYP22749 145 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 AHCYP23526 432 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 CA7P43166 264 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 RPL18Q07020 188 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 PUDPQ08623 228 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 RASGEF1BQ0VAM2 473 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 FHL1Q13642 323 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 MS4A18Q3C1V0 323 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 ANKDD1AQ495B1 522 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 LPCAT4Q643R3 524 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 GTF2IRD2BQ6EKJ0 949 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 ZBTB49Q6ZSB9 765 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 GPAT4Q86UL3 456 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 GTF2IRD2Q86UP8 949 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 RPRMLQ8N4K4 120 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 CBR4Q8N4T8 237 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 C9orf106Q8NAJ2 232 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 MOSPD2Q8NHP6 518 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 ABHD3Q8WU67 409 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 RBM4BQ9BQ04 359 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 RBM4Q9BWF3 364 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 MCCC2Q9HCC0 563 aa21.05■□□□□ 0.96
TSPAN4-203ENST00000397397 EI24O14681 340 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 RNF13O43567 381 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 VAMP5O95183 116 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 HPRP00739 348 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 UQCRC1P31930 480 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 RPS4XP62701 263 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 ZP4Q12836 540 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 COX10Q12887 443 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 DAG1Q14118 895 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 RNPS1Q15287 305 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 TAF11Q15544 211 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 KLHL17Q6TDP4 642 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 CD300LDQ6UXZ3 194 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 RASSF6Q6ZTQ3 369 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 FANK1Q8TC84 345 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 DNAJC9Q8WXX5 260 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 OXGR1Q96P68 337 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 TM9SF2Q99805 663 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 OSBPL10Q9BXB5 764 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 RNF122Q9H9V4 155 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 KRT84Q9NSB2 600 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 KLHL9Q9P2J3 617 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 A0A1W2PNV4 684 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 MBD3L4A6NDZ8 208 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 MBD3L3A6NE82 208 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 MBD3L5A6NJ08 208 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 SOCS2O14508 198 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 CASQ2O14958 399 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 RCBTB2O95199 551 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 STSP08842 583 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 TSPAN19P0C672 248 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 PEX2P28328 305 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 UQCRFS1P47985 274 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 PRPS1P60891 318 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 PPP2R2BQ00005 443 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 LRRC36Q1X8D7 754 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 ZNF620Q6ZNG0 422 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 SEM1Q6ZVN7 128 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 MBD3L2Q8NHZ7 208 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 TTYH2Q9BSA4 534 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 SF3B5Q9BWJ5 86 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 NDEL1Q9GZM8 345 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 PAPOLBQ9NRJ5 636 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 CLEC4AQ9UMR7 237 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 POFUT2Q9Y2G5 429 aa21.04■□□□□ 0.96
TSPAN4-203ENST00000397397 ZNF716A6NP11 495 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 SERPINI2O75830 405 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 PLGP00747 810 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 GLI4P10075 376 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 SLC17A1Q14916 467 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 EIF2S3LQ2VIR3 472 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 ALG10Q5BKT4 473 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 KDM4DQ6B0I6 523 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 SMARCD3Q6STE5 483 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 GALNT5Q7Z7M9 940 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 KIF18BQ86Y91 864 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 UEVLDQ8IX04 471 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 OR9K2Q8NGE7 335 aa21.03■□□□□ 0.96
TSPAN4-203ENST00000397397 PRR7Q8TB68 274 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms