RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 FHL1Q13642 323 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 GINS1Q14691 196 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 SF3B4Q15427 424 aaKnown RBP eCLIP21.12■□□□□ 0.972e-7■■■■■ 32.9
TSPAN4-202ENST00000397396 PGGHGQ32M88 737 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 ANKK1Q8NFD2 765 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 OR8D4Q8NGM9 314 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 FAR1Q8WVX9 515 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 PRDM14Q9GZV8 571 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 INIPQ9NRY2 104 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 SPRR3Q9UBC9 169 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 MCTS1Q9ULC4 181 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 FREM3P0C091 2139 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 NPIPB13A6NJU9 1138 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 NPIPB4C9JG80 1138 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 CXCL13O43927 109 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 MPZL2O60487 215 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 AKR7A3O95154 331 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 SYNGR4O95473 234 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 CD14P08571 375 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 GRK5P34947 590 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 POLR2IP36954 125 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 SUCLG1P53597 346 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 CLDN15P56746 228 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 FXYD6P3P58550 94 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 C19orf57Q0VDD7 668 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 CLEC12AQ5QGZ9 265 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 ZNF324BQ6AW86 544 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 C8orf59Q8N0T1 100 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 LNX2Q8N448 690 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 WDYHV1Q96HA8 205 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 IMPAD1Q9NX62 359 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 TAS2R5Q9NYW4 299 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 NOX1Q9Y5S8 564 aa21.11■□□□□ 0.97
TSPAN4-202ENST00000397396 LOC102725191A0A1B0GVB3 256 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 A0A1W2PRG6 482 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 BHLHE40O14503 412 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 IMPA2O14732 288 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 ARPC3O15145 178 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 DENRO43583 198 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 AHCYP23526 432 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 NOS3P29474 1203 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 H3F3AP84243 136 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 SRYQ05066 204 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 EMC4Q5J8M3 183 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 C12orf73Q69YU5 71 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 GPR139Q6DWJ6 353 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 TMEM225Q6GV28 225 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 THSD4Q6ZMP0 1018 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 HDDC2Q7Z4H3 204 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 PXKQ7Z7A4 578 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 TMEM99Q8N816 258 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 MOSPD2Q8NHP6 518 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 FAM81AQ8TBF8 368 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 RELTQ969Z4 430 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 SF3B5Q9BWJ5 86 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 POLDIP3Q9BY77 421 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 NRIP3Q9NQ35 241 aa21.1■□□□□ 0.97
TSPAN4-202ENST00000397396 MCIDASD6RGH6 385 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 IFNGP01579 166 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 IGFBP1P08833 259 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 EPHA2P29317 976 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 DAP3P51398 398 aaKnown RBP21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 CTXN1P60606 82 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 MED21Q13503 144 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 POU4F3Q15319 338 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 ZNF691Q5VV52 312 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 FAM205BPQ63HN1 556 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 USP51Q70EK9 711 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 CISD2Q8N5K1 135 aaKnown RBP21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 LRRC75AQ8NAA5 344 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 TRUB1Q8WWH5 349 aaKnown RBP21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 PLEKHA8Q96JA3 519 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 OXGR1Q96P68 337 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 SRXN1Q9BYN0 137 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 CAMK2AQ9UQM7 478 aa21.09■□□□□ 0.97
TSPAN4-202ENST00000397396 A0A1B0GTH9 108 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 C11orf98E9PRG8 122 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 H0YC42 278 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 IGHMP01871 453 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 FCGR2AP12318 317 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 MYF6P23409 242 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 MYBPC1Q00872 1141 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 GXYLT1Q4G148 440 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 UEVLDQ8IX04 471 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 ZPLD1Q8TCW7 415 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 KATNB1Q9BVA0 655 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 SEC14L4Q9UDX3 406 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 IL20RAQ9UHF4 553 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 KLHL21Q9UJP4 597 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 ZNF175Q9Y473 711 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 LAMA5O15230 3695 aa21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 TPRP12270 2363 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-202ENST00000397396 MS4A18H0YCH9 400 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 M0R3G1 203 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 PPP1R3DO95685 299 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 SDHAP31040 664 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 P2RY4P51582 365 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 C1DQ13901 141 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 MS4A18Q3C1V0 323 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 TMEM236Q5W0B7 351 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms