RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 NMNAT3Q96T66 252 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 DDOQ99489 341 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 RABL2AQ9UBK7 228 aaPredicted RBP16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 NUP50Q9UKX7 468 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 RABL2BQ9UNT1 228 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 PSMD9O00233 223 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 PRAF2O60831 178 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 CLDN12P56749 244 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 LGALS3BPQ08380 585 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 AANATQ16613 207 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 ELFN2Q5R3F8 820 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 GLRX5Q86SX6 157 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 ZNF433Q8N7K0 673 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 FAM71CQ8NEG0 241 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 RGP1Q92546 391 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 PHYHIPQ92561 330 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 SGTBQ96EQ0 304 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 LCORQ96JN0 433 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 NPDC1Q9NQX5 325 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 SLC2A4RGQ9NR83 387 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 KLHL9Q9P2J3 617 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 CA14Q9ULX7 337 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 A6NCN8 305 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 OR6C68A6NDL8 312 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 PRR32B1ATL7 298 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 ARPC1BO15143 372 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 KRT33AO76009 404 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 ECDO95905 644 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 IFI6P09912 130 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 SPI1P17947 270 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 EPHA4P54764 986 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 KIAA1024LP59773 190 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 NANOS3P60323 173 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 MRPS21P82921 87 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 GPR18Q14330 331 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 ULK3Q6PHR2 472 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 OR6K6Q8NGW6 343 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 OR2T4Q8NH00 348 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 RNF166Q96A37 237 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 SEC22CQ9BRL7 303 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 AKAP7Q9P0M2 348 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 KLK11Q9UBX7 282 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 SPEF1Q9Y4P9 236 aa16.78■□□□□ 0.28
PCDHA1-202ENST00000394633 MPDZO75970 2070 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 GON4LQ3T8J9 2241 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 A0A1B0GUH1 482 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 NAP1L6A6NFF2 107 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 PDCD5O14737 125 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 GALR3O60755 368 aaPredicted RBP16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 RPL4P36578 427 aaKnown RBP16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 PTH2RP49190 550 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 METTL11BQ5VVY1 283 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 APOOLQ6UXV4 268 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 RASD2Q96D21 266 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 CLIP3Q96DZ5 547 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 OMA1Q96E52 524 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 SIPA1Q96FS4 1042 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 RBCK1Q9BYM8 510 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 CHIAQ9BZP6 476 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 LIN7BQ9HAP6 207 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 MKKSQ9NPJ1 570 aaPredicted RBP16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 ZNF281Q9Y2X9 895 aa16.77■□□□□ 0.28
PCDHA1-202ENST00000394633 A0A087WV48 116 aa16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 OR5K3A6NET4 321 aa16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 GRPRP30550 384 aa16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 RAD52P43351 418 aa16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 NFATC4Q14934 902 aa16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 NDUFAF6Q330K2 333 aa16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 RSC1A1Q92681 617 aa16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 LMF2Q9BU23 707 aaKnown RBP16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 NMNAT2Q9BZQ4 307 aa16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 STARD5Q9NSY2 213 aa16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 PPIEQ9UNP9 301 aaKnown RBP16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 FOXJ3Q9UPW0 622 aa16.77■□□□□ 0.27
PCDHA1-202ENST00000394633 WDFY4Q6ZS81 3184 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 A0A1B0GTQ1 180 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 KHDRBS3O75525 346 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 RASGRP1O95267 797 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 RRASP10301 218 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 PTHLHP12272 177 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 S1PR1P21453 382 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 TSPAN5P62079 268 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 TCTE1Q5JU00 501 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 SLC35D3Q5M8T2 416 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 PWWP2BQ6NUJ5 590 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 DPY19L2P2Q6ZN68 376 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 UXS1Q8NBZ7 420 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 FCAMRQ8WWV6 532 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 GPR174Q9BXC1 333 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 PIPOXQ9P0Z9 390 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 OR5V1Q9UGF6 321 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 V9GY05 133 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 TCRBV21S2A2A0A5A6 115 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 ANKRD20A5PA0PJZ0 165 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 M0R233 179 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 ITGA10O75578 1167 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 ZFPL1O95159 310 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 HRGP04196 525 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 HOXC4P09017 264 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms