RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RNF170Q96K19 258 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 MAP3K3Q99759 626 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 PIGQQ9BRB3 760 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ZNF649Q9BS31 505 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 STRADBQ9C0K7 418 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 C20orf85Q9H1P6 137 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ANKRD19PQ9H560 264 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 HHATLQ9HCP6 504 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 PURGQ9UJV8 347 aaKnown RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 ENPP4Q9Y6X5 453 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 SERTM1A2A2V5 107 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 FAM74A7A6NL05 159 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 FAAHO00519 579 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 LRRTM2O43300 516 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 GMFGO60234 142 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 CYTIPO60759 359 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 LDB3O75112 727 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 PRSS23O95084 383 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 KCNK5O95279 499 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ETHE1O95571 254 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 SPP1P10451 314 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 TFPIP10646 304 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 NME1P15531 152 aaKnown RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 CXCL3P19876 107 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 CPT2P23786 658 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ETV5P41161 510 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ART1P52961 327 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 NDUFA6P56556 154 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 RIN1Q13671 783 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 AGERQ15109 404 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 BATFQ16520 125 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 FAM74A3Q4VXF1 159 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 SLC6A19Q695T7 634 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 Q7L0L9 218 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ZNF550Q7Z398 422 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 CBLN2Q8IUK8 224 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ZNF565Q8N9K5 539 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 OR14K1Q8NGZ2 314 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 OR4C6Q8NH72 309 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 PHOSPHO1Q8TCT1 267 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 MSLNLQ96KJ4 702 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 CD180Q99467 661 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 TTTY10Q9BZA0 68 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 IKZF5Q9H5V7 419 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 NLGN3Q9NZ94 848 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 FTSJ1Q9UET6 329 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 SH2B3Q9UQQ2 575 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ATG2BQ96BY7 2078 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ARID1BQ8NFD5 2236 aaPredicted RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 KCNE1BA0A087WTH5 132 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 A0A0D9SG52 128 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 TRABD2BA6NFA1 517 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ELOA3DA6NLF2 546 aaPredicted RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 RIIAD1A6NNX1 92 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ADAM11O75078 769 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 DBIP07108 87 aaKnown RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 GIPP09681 153 aaPredicted RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 SBK2P0C263 348 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CLUP10909 449 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 CPMP14384 443 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 FPR3P25089 353 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 GDNFP39905 211 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RGS19P49795 217 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RAB38P57729 211 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 IRF3Q14653 427 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 PON3Q15166 354 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 NSDHLQ15738 373 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ELOA3BQ3SY89 546 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 GLT8D1Q68CQ7 371 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 OR5M10Q6IEU7 315 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 PLBD1Q6P4A8 553 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ULK3Q6PHR2 472 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 FIGNL1Q6PIW4 674 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 PAQR6Q6TCH4 344 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 BCDIN3DQ7Z5W3 292 aaKnown RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 ZNF561Q8N587 486 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ACBD7Q8N6N7 88 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 BPIFCQ8NFQ6 507 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ELOA3Q8NG57 546 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 OR52H1Q8NGJ2 320 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 OR5D16Q8NGK9 328 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 OR10R2Q8NGX6 335 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 GNPDA2Q8TDQ7 276 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 GRHL3Q8TE85 626 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 MR1Q95460 341 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 RBP7Q96R05 134 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 PITX2Q99697 317 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 GABARAPL1Q9H0R8 117 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 SLC25A32Q9H2D1 315 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 DDX31Q9H8H2 851 aaKnown RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 DLL4Q9NR61 685 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 NDUFB11Q9NX14 153 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 NOSIPQ9Y314 301 aaKnown RBP5.25□□□□□ -1.57
RFFL-202ENST00000394597 MED31Q9Y3C7 131 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 ATG4BQ9Y4P1 393 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 TRPM6Q9BX84 2022 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 SPTA1P02549 2419 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 TLCD2A6NGC4 264 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 EEF1E1-BLOC1S5C9J1V9 151 aa5.25□□□□□ -1.57
RFFL-202ENST00000394597 H7C1Q1 480 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms