RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 VRK2Q86Y07 508 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 CADM2Q8N3J6 435 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 PKNOX2Q96KN3 472 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 TEX37Q96LM6 180 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 PTDSS2Q9BVG9 487 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 METTL17Q9H7H0 456 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-202ENST00000393773 MTHFD2LQ9H903 347 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-202ENST00000393773 B3GAT1Q9P2W7 334 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 A0A096LPI6 279 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 CCDC154A6NI56 674 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 B4DSR2 109 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 TYROBPO43914 113 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 ADRA2AP08913 450 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 TFPTP0C1Z6 253 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 NR2F1P10589 423 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 IL1RL1Q01638 556 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 NPRL3Q12980 569 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 RNF220Q5VTB9 566 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 UGT2A3Q6UWM9 527 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 MDP1Q86V88 176 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 PEX5LQ8IYB4 626 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 CLDND2Q8NHS1 167 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 PNPT1Q8TCS8 783 aaKnown RBP13.25□□□□□ -0.29
CHMP3-202ENST00000393773 ZNF837Q96EG3 531 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-202ENST00000393773 C20orf27Q9GZN8 174 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 OCEL1Q9H607 264 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 GPR35Q9HC97 309 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 SEC14L4Q9UDX3 406 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 METRNQ9UJH8 293 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 CHST2Q9Y4C5 530 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 SPEF1Q9Y4P9 236 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 TRRAPQ9Y4A5 3859 aa13.25□□□□□ -0.29
CHMP3-202ENST00000393773 TGP01266 2768 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 FAM157AC9JC47 383 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 SEC14L2O76054 403 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 ALDOCP09972 364 aaKnown RBP13.24□□□□□ -0.29
CHMP3-202ENST00000393773 IL12AP29459 219 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 S100A3P33764 101 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 ARR3P36575 388 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 ANXA11P50995 505 aaKnown RBP13.24□□□□□ -0.29
CHMP3-202ENST00000393773 MVDP53602 400 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 CLDN17P56750 224 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 EGR4Q05215 589 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 DAG1Q14118 895 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 CEACAM16Q2WEN9 425 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 ELFN2Q5R3F8 820 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 KRT80Q6KB66 452 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 LRRC34Q8IZ02 419 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 TRIML2Q8N7C3 387 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 MFSD8Q8NHS3 518 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 KIF18AQ8NI77 898 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 STK35Q8TDR2 534 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 MRPL24Q96A35 216 aaKnown RBP13.24□□□□□ -0.29
CHMP3-202ENST00000393773 ZMYND19Q96E35 227 aaPredicted RBP13.24□□□□□ -0.29
CHMP3-202ENST00000393773 PANX1Q96RD7 426 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 SORT1Q99523 831 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 MRPL37Q9BZE1 423 aaKnown RBP13.24□□□□□ -0.29
CHMP3-202ENST00000393773 RACGAP1Q9H0H5 632 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 PRDM4Q9UKN5 801 aa13.24□□□□□ -0.29
CHMP3-202ENST00000393773 ZNF443Q9Y2A4 671 aaPredicted RBP13.24□□□□□ -0.29
CHMP3-202ENST00000393773 SH3PXD2BA1X283 911 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 AHSA1O95433 338 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 GSNP06396 782 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 EGR1P18146 543 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 NME5P56597 212 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 COPZ1P61923 177 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 ACTG1P63261 375 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 OGFOD2Q6N063 350 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 SERPINA11Q86U17 422 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 CARM1Q86X55 608 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 TMEM123Q8N131 208 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 KDM8Q8N371 416 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 CLIP4Q8N3C7 705 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 OR52P1PQ8NH57 321 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 TMEM186Q96B77 213 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 ZNF75AQ96N20 296 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 CRLF2Q9HC73 371 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 SLC6A13Q9NSD5 602 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 HIF1ANQ9NWT6 349 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 P2RX2Q9UBL9 471 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 HAO1Q9UJM8 370 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 RAP2CQ9Y3L5 183 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 WNK2Q9Y3S1 2297 aa13.23□□□□□ -0.29
CHMP3-202ENST00000393773 M0R233 179 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 WNT9BO14905 357 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 TRAF3IP2O43734 574 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-202ENST00000393773 SYNGR3O43761 229 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 SLC43A1O75387 559 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 HPXP02790 462 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 SERPINE1P05121 402 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 BCHEP06276 602 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 MSMBP08118 114 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 MYZAPP0CAP1 466 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 SAGP10523 405 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-202ENST00000393773 ZNF43P17038 809 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 LBPP18428 481 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 NR4A1P22736 598 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 RPS5P46782 204 aaKnown RBP13.22□□□□□ -0.29
CHMP3-202ENST00000393773 EVX1P49640 407 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms