RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.78□□□□□ -0.36
MSH5-202ENST00000375740 COL28A1Q2UY09 1125 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 KLHL26Q53HC5 615 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 KANSL1Q7Z3B3 1105 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 GATSQ8NAP1 163 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 ERMAPQ96PL5 475 aaPredicted RBP12.78□□□□□ -0.36
MSH5-202ENST00000375740 PELOQ9BRX2 385 aaKnown RBP12.78□□□□□ -0.36
MSH5-202ENST00000375740 LRRN3Q9H3W5 708 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 RANBP3Q9H6Z4 567 aaPredicted RBP12.78□□□□□ -0.36
MSH5-202ENST00000375740 MKKSQ9NPJ1 570 aaPredicted RBP12.78□□□□□ -0.36
MSH5-202ENST00000375740 UBQLN2Q9UHD9 624 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 EFCAB7A8K855 629 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 H3BMH7 237 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 ZNF3P17036 446 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 ELK1P19419 428 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 BCKDHBP21953 392 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 GPR143P51810 404 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 PRAMEF17Q5VTA0 474 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 MED25Q71SY5 747 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 OR10Z1Q8NGY1 313 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 AP3S1Q92572 193 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 SGTBQ96EQ0 304 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 HEATR5AQ86XA9 2040 aa12.78□□□□□ -0.36
MSH5-202ENST00000375740 A0A087WUJ7 227 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 TMEM150CB9EJG8 249 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 RNF13O43567 381 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 NDUFA2O43678 99 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 SBK2P0C263 348 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 EPHA4P54764 986 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 STARD6P59095 220 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 CFHR1Q03591 330 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 CAMK2DQ13557 499 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 SHEQ5VZ18 495 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 IL20RBQ6UXL0 311 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 TMEM151BQ8IW70 566 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 OR52E2Q8NGJ4 325 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 OR6M1Q8NGM8 313 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 NEIL3Q8TAT5 605 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 ABCG5Q9H222 651 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 ADGRL4Q9HBW9 690 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 DHCR7Q9UBM7 475 aaKnown RBP12.77□□□□□ -0.36
MSH5-202ENST00000375740 ICAM5Q9UMF0 924 aa12.77□□□□□ -0.36
MSH5-202ENST00000375740 A0A1W2PPL8 197 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 E9PI62 339 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 LGALS8O00214 317 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 KHNYNO15037 678 aaKnown RBP12.77□□□□□ -0.37
MSH5-202ENST00000375740 MYF5P13349 255 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 GBX2P52951 348 aaPredicted RBP12.77□□□□□ -0.37
MSH5-202ENST00000375740 SLC37A1P57057 533 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 BDH1Q02338 343 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 BIKQ13323 160 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 OR4K13Q8NH42 304 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 SMPDL3BQ92485 455 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 TSLPQ969D9 159 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 SCMH1Q96GD3 660 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 RNF32Q9H0A6 362 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 BEX1Q9HBH7 125 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 CHRNA9Q9UGM1 479 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 SERTAD3Q9UJW9 196 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 GMEB2Q9UKD1 530 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 PPIEQ9UNP9 301 aaKnown RBP12.77□□□□□ -0.37
MSH5-202ENST00000375740 IER3IP1Q9Y5U9 82 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 SPAG17Q6Q759 2223 aa12.77□□□□□ -0.37
MSH5-202ENST00000375740 IGHV1OR21-1A0A087WYE8 117 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 NDUFB2O95178 105 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 IFNA7P01567 189 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 IFNGP01579 166 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 STOMP27105 288 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 ARL4DP49703 201 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 HSD11B2P80365 405 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 ZNF85Q03923 595 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 ZNF273Q14593 569 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 ARHGAP11AQ6P4F7 1023 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 NR2C2APQ86WQ0 139 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 LINC00518Q8N0U6 118 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 LSM14AQ8ND56 463 aaKnown RBP12.76□□□□□ -0.37
MSH5-202ENST00000375740 OR5W2Q8NH69 310 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 C3orf49Q96BT1 292 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 REG4Q9BYZ8 158 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 OR8D2Q9GZM6 311 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 CLEC4MQ9H2X3 399 aaPredicted RBP12.76□□□□□ -0.37
MSH5-202ENST00000375740 INPP5EQ9NRR6 644 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 EXTL2Q9UBQ6 330 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 CACNA1IQ9P0X4 2223 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 MCIDASD6RGH6 385 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 OIP5O43482 229 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 GAAP10253 952 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 ANXA3P12429 323 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 HIST1H1CP16403 213 aaKnown RBP12.76□□□□□ -0.37
MSH5-202ENST00000375740 BTG1P62324 171 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 CD226Q15762 336 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 STPG2Q8N412 459 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 FAM98AQ8NCA5 519 aaKnown RBP12.76□□□□□ -0.37
MSH5-202ENST00000375740 SDR9C7Q8NEX9 313 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 OR1L3Q8NH93 324 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 LILRB1Q8NHL6 650 aaPredicted RBP12.76□□□□□ -0.37
MSH5-202ENST00000375740 GSX2Q9BZM3 304 aa12.76□□□□□ -0.37
MSH5-202ENST00000375740 NXF5Q9H1B4 397 aaKnown RBP12.76□□□□□ -0.37
MSH5-202ENST00000375740 J3QLW9 94 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 RGS11O94810 467 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms