RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CYB561P49447 251 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 AGERQ15109 404 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 AAED1Q7RTV5 226 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 YRDCQ86U90 279 aaKnown RBP16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 ZSCAN4Q8NAM6 433 aaPredicted RBP16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 CLCC1Q96S66 551 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 TWSG1Q9GZX9 223 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 ENKD1Q9H0I2 346 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 NUDT15Q9NV35 164 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 DSCR3O14972 297 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 NUDT21O43809 227 aaKnown RBP16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 CRTAPO75718 401 aaPredicted RBP16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 OR2J2O76002 312 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 YES1P07947 543 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 CLEC2LP0C7M8 214 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 SMIM18P0DKX4 95 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 AMY2BP19961 511 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 RSU1Q15404 277 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 THOC3Q96J01 351 aaKnown RBP16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 MMP28Q9H239 520 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 R4GN57 208 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 V9GY05 133 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 ZNF318Q5VUA4 2279 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 FAM230AA0A1W2PPH8 454 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 GSTT2P0CG29 244 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 MEP1BQ16820 701 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 CALHM3Q86XJ0 350 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 LACC1Q8IV20 430 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 TMEM106AQ96A25 262 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 MVB12AQ96EY5 273 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 TEAD3Q99594 435 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 C14orf166Q9Y224 244 aaKnown RBP16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 PIKFYVEQ9Y2I7 2098 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 OR2T7P0C7T2 308 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 GRK5P34947 590 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 PRSS3P35030 304 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 DHRS4L2Q6PKH6 230 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 DPY19L2P2Q6ZN68 376 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 SLC46A3Q7Z3Q1 461 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 GALNT11Q8NCW6 608 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 OR2T27Q8NH04 317 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 ANKRD19PQ9H560 264 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 RNF167Q9H6Y7 350 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 KCND3Q9UK17 655 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 B3GNT3Q9Y2A9 372 aa16.5■□□□□ 0.23
PTPDC1-202ENST00000375360 IGHV1OR21-1A0A087WYE8 117 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 ZNF850A8MQ14 1090 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 FAM166BA8MTA8 275 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 CSO75390 466 aaKnown RBP16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 HTR1FP30939 366 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 CEBPGP53567 150 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 LANCL3Q6ZV70 420 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 MISPQ8IVT2 679 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 INO80EQ8NBZ0 244 aaPredicted RBP16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 BORCS8Q96FH0 119 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 DUS3LQ96G46 650 aaKnown RBP16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 PDCD1LG2Q9BQ51 273 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 CDH20Q9HBT6 801 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 HYAL3O43820 417 aaPredicted RBP16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 SELENOFO60613 162 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 OR7A10O76100 309 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 RFC3P40938 356 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 TMEM244Q5VVB8 128 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 GRINAQ7Z429 371 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 CPEB2Q7Z5Q1 589 aaKnown RBP16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 ZNF615Q8N8J6 731 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 SIMC1Q8NDZ2 872 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 OR5J2Q8NH18 312 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 SCGB3A2Q96PL1 93 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 METTL15A6NJ78 407 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 AMY2AP04746 511 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 SLC2A1P11166 492 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 EMDP50402 254 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 ARHGDIBP52566 201 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 GPR50Q13585 617 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 ZNF620Q6ZNG0 422 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 GRAMD2AQ8IUY3 354 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 ZNF845Q96IR2 970 aaPredicted RBP16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 EVA1AQ9H8M9 152 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 CALHM2Q9HA72 323 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 DOCK6Q96HP0 2047 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 A0A087WV62 115 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 POU2F2P09086 479 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 H2AFB2P0C5Z0 115 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 NKX2-5P52952 324 aaPredicted RBP16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 FOXK1P85037 733 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 FAM57BQ71RH2 274 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 ZNF431Q8TF32 576 aaPredicted RBP16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 TXNL4BQ9NX01 149 aaKnown RBP16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 DIMT1Q9UNQ2 313 aaKnown RBP16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 CORINQ9Y5Q5 1042 aa16.49■□□□□ 0.23
PTPDC1-202ENST00000375360 PRH1P02810 166 aa16.48■□□□□ 0.23
PTPDC1-202ENST00000375360 SNRPBP14678 240 aaKnown RBP16.48■□□□□ 0.23
PTPDC1-202ENST00000375360 C6orf15Q6UXA7 325 aaPredicted RBP16.48■□□□□ 0.23
PTPDC1-202ENST00000375360 C16orf47Q6ZP98 133 aaPredicted RBP16.48■□□□□ 0.23
PTPDC1-202ENST00000375360 FCRLAQ7L513 359 aa16.48■□□□□ 0.23
PTPDC1-202ENST00000375360 NDUFAF7Q7L592 441 aa16.48■□□□□ 0.23
PTPDC1-202ENST00000375360 MRPL21Q7Z2W9 205 aaKnown RBP16.48■□□□□ 0.23
PTPDC1-202ENST00000375360 CMIPQ8IY22 773 aa16.48■□□□□ 0.23
PTPDC1-202ENST00000375360 GDPD1Q8N9F7 314 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms