RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 EIF4E3Q8N5X7 224 aaKnown RBP19.37■□□□□ 0.69
UPF3A-202ENST00000375299 DMRTA2Q96SC8 542 aa19.37■□□□□ 0.69
UPF3A-202ENST00000375299 DAPP1Q9UN19 280 aa19.37■□□□□ 0.69
UPF3A-202ENST00000375299 ENTPD2Q9Y5L3 495 aa19.37■□□□□ 0.69
UPF3A-202ENST00000375299 TP53BP1Q12888 1972 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-202ENST00000375299 OTOL1A6NHN0 477 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-202ENST00000375299 TEX46H3BTG2 121 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 CTNSO60931 367 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 ZFPL1O95159 310 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 SLC35G6P0C7Q6 338 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 AK4P27144 223 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-202ENST00000375299 RBMS2Q15434 407 aaKnown RBP19.36■□□□□ 0.69
UPF3A-202ENST00000375299 C2orf68Q2NKX9 166 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 GAB4Q2WGN9 574 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 ALG10BQ5I7T1 473 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 DNM1P46Q6ZS02 220 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 ZAR1Q86SH2 424 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 SPPL3Q8TCT6 385 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 EXOSC3Q9NQT5 275 aaKnown RBP19.36■□□□□ 0.69
UPF3A-202ENST00000375299 TMEM74BQ9NUR3 256 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 WSB2Q9NYS7 404 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-202ENST00000375299 A0A087WV62 115 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 PRR19A6NJB7 356 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 LRRC72A6NJI9 287 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 F5H5P2 479 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 NUPL2O15504 423 aaKnown RBP19.36■□□□□ 0.69
UPF3A-202ENST00000375299 FAUP35544 74 aaKnown RBP19.36■□□□□ 0.69
UPF3A-202ENST00000375299 OC90Q02509 493 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-202ENST00000375299 UBXN2BQ14CS0 331 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 STAC2Q6ZMT1 411 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 CDH26Q8IXH8 852 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 ZNF614Q8N883 585 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 ZNF454Q8N9F8 522 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 ZDHHC1Q8WTX9 485 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 PMM1Q92871 262 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 GPR160Q9UJ42 338 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 FBXL2Q9UKC9 423 aa19.36■□□□□ 0.69
UPF3A-202ENST00000375299 CHURC1-FNTBB4DL54 471 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 PSMD9O00233 223 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 B3GALT2O43825 422 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 AQP8O94778 261 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 GLSO94925 669 aaPredicted RBP19.35■□□□□ 0.69
UPF3A-202ENST00000375299 SMIM10L1P0DMW3 83 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 SLC35D3Q5M8T2 416 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 DND1Q8IYX4 353 aaKnown RBP19.35■□□□□ 0.69
UPF3A-202ENST00000375299 OR2AK2Q8NG84 335 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 OR5M9Q8NGP3 310 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 ZNF707Q96C28 371 aaPredicted RBP19.35■□□□□ 0.69
UPF3A-202ENST00000375299 SMIM10Q96HG1 83 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 SLITRK2Q9H156 845 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 TSPAN10Q9H1Z9 355 aaPredicted RBP19.35■□□□□ 0.69
UPF3A-202ENST00000375299 EVA1AQ9H8M9 152 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 TCF7L1Q9HCS4 588 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 ADAM18Q9Y3Q7 739 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 SLC22A7Q9Y694 548 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 ADAM11O75078 769 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 SPI1P17947 270 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 GABRA3P34903 492 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 NDUFAF6Q330K2 333 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 AGBL4Q5VU57 503 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 ZNF660Q6AZW8 331 aaPredicted RBP19.35■□□□□ 0.69
UPF3A-202ENST00000375299 OR7E24Q6IFN5 339 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 ZCCHC12Q6PEW1 402 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 GLB1L2Q8IW92 636 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 OR6K6Q8NGW6 343 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 NMNAT3Q96T66 252 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 TRIM2Q9C040 744 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 KIR3DX1Q9H7L2 352 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 IFT46Q9NQC8 304 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 HRH3Q9Y5N1 445 aa19.35■□□□□ 0.69
UPF3A-202ENST00000375299 D6RAR5 112 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 GOSR2O14653 212 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 IMPA2O14732 288 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 PAK4O96013 591 aaPredicted RBP19.34■□□□□ 0.69
UPF3A-202ENST00000375299 CEACAM5P06731 702 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 TMIGD3P0DMS9 266 aaPredicted RBP19.34■□□□□ 0.69
UPF3A-202ENST00000375299 EMDP50402 254 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 EXOSC7Q15024 291 aaKnown RBP19.34■□□□□ 0.69
UPF3A-202ENST00000375299 NPEPL1Q8NDH3 523 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 RNF166Q96A37 237 aaPredicted RBP19.34■□□□□ 0.69
UPF3A-202ENST00000375299 PELOQ9BRX2 385 aaKnown RBP19.34■□□□□ 0.69
UPF3A-202ENST00000375299 SEMA4CQ9C0C4 833 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 IL23AQ9NPF7 189 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 P2RX6O15547 441 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 SDC3O75056 442 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 LDB3O75112 727 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 TPPPO94811 219 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 MAPK3P27361 379 aaPredicted RBP19.34■□□□□ 0.69
UPF3A-202ENST00000375299 MAP3K8P41279 467 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 ACAA2P42765 397 aaKnown RBP19.34■□□□□ 0.69
UPF3A-202ENST00000375299 PCGF3Q3KNV8 242 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 OR4E2Q8NGC2 313 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 OR4C16Q8NGL9 310 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 ZPLD1Q8TCW7 415 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 FKRPQ9H9S5 495 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 PRDM9Q9NQV7 894 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 POLE3Q9NRF9 147 aa19.34■□□□□ 0.69
UPF3A-202ENST00000375299 CXXC1Q9P0U4 656 aaPredicted RBP19.34■□□□□ 0.69
UPF3A-202ENST00000375299 PRR32B1ATL7 298 aa19.33■□□□□ 0.69
UPF3A-202ENST00000375299 SCAMP1O15126 338 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms