RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 NKX2-8O15522 239 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 RNF13O43567 381 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 NEURL1O76050 574 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 SDHBP21912 280 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 ATP6V1E1P36543 226 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 OR7A5Q15622 319 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 TBC1D25Q3MII6 688 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 GLYR1Q49A26 553 aaPredicted RBP23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 GPR107Q5VW38 600 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 LINC00696Q6ZRV3 163 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 OR5M1Q8NGP8 315 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 Q96M85 177 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 INIPQ9NRY2 104 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 CHCHD3Q9NX63 227 aaKnown RBP23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 EXOGQ9Y2C4 368 aaKnown RBP23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 TEX13CA0A0J9YWL9 993 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 LIPT2A6NK58 231 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 ZIC3O60481 467 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 TRMUO75648 421 aaKnown RBP23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 WDPCPO95876 746 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 F10P00742 488 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 ADRA2AP08913 450 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 PRKAR1AP10644 381 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 ZNF17P17021 662 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 MYL12AP19105 171 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 CLN3Q13286 438 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 CRTC2Q53ET0 693 aaPredicted RBP23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 JAZF1Q86VZ6 243 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 RASD2Q96D21 266 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 TEAD3Q99594 435 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 MND1Q9BWT6 205 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 OR51V1Q9H2C8 321 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 SEC14L4Q9UDX3 406 aa23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 RPH3AQ9Y2J0 694 aaPredicted RBP23.7■■□□□ 1.38
ATPAF1-202ENST00000371937 A0A0G2JMM0 328 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 A0A1W2PPB8 328 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 A0A1W2PRS3 328 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 KIR3DP1A8MWS1 328 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 PTHP01270 115 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 SLC2A5P22732 501 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 AHCYP23526 432 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 SRD5A2P31213 254 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 RPS7P62081 194 aaKnown RBP23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 FOXK1P85037 733 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 MYBPHQ13203 477 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 OR1C1Q15619 314 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 CNPY1Q3B7I2 92 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 H1FNTQ75WM6 255 aaPredicted RBP23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 ZNF367Q7RTV3 350 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 LSM14AQ8ND56 463 aaKnown RBP23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 NPEPL1Q8NDH3 523 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 ZNF248Q8NDW4 579 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 NMNAT3Q96T66 252 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 ALKBH4Q9NXW9 302 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 TAS2R16Q9NYV7 291 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 BOKQ9UMX3 212 aaPredicted RBP23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 EXOSC1Q9Y3B2 195 aaKnown RBP23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 HDGFL3Q9Y3E1 203 aa23.69■■□□□ 1.38
ATPAF1-202ENST00000371937 DCDC2BA2VCK2 349 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 C11orf98E9PRG8 122 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 IMPDH2P12268 514 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 LGALS3BPQ08380 585 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 SRSF6Q13247 344 aaKnown RBP23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 RAET1LQ5VY80 246 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 PROKR2Q8NFJ6 384 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 DDOQ99489 341 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 FAM173AQ9BQD7 235 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 PIGQQ9BRB3 760 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 ZFP64Q9NPA5 681 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 DEPPQ9NTK1 212 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 FREM2Q5SZK8 3169 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 NOL3O60936 208 aaKnown RBP23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 FZD7O75084 574 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 SLC16A1P53985 500 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 GPR85P60893 370 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 ZP4Q12836 540 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 TIGD6Q17RP2 521 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 RELTQ969Z4 430 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 ISOC1Q96CN7 298 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 SIGLEC12Q96PQ1 595 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 TSPAN32Q96QS1 320 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 TMEM185BQ9H7F4 350 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 HAO2Q9NYQ3 351 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 TNFRSF10DQ9UBN6 386 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 POLHQ9Y253 713 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 B3GALT5Q9Y2C3 310 aa23.68■■□□□ 1.38
ATPAF1-202ENST00000371937 A6NL46 340 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 APOL3O95236 402 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 TMBIM6P55061 237 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 PUDPQ08623 228 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 TOMM20Q15388 145 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 LEG1Q6P5S2 330 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 B3GNT6Q6ZMB0 384 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 NANOGP1Q8N7R0 232 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 COG8Q96MW5 612 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 OR5B2Q96R09 309 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 UBL7Q96S82 380 aaPredicted RBP23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 CHST11Q9NPF2 352 aa23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 ZNF346Q9UL40 294 aaKnown RBP23.67■■□□□ 1.38
ATPAF1-202ENST00000371937 MRPS18CQ9Y3D5 142 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms