RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 hCG_1807616A0A1W2PRN6 198 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 C5orf51A6NDU8 294 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 RTCAO00442 366 aaKnown RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 CSTBP04080 98 aaKnown RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 CHRM4P08173 479 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 P2RX1P51575 399 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 PGDP52209 483 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 PDX1P52945 283 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 MFGE8Q08431 387 aaPredicted RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 SLC35A4Q96G79 324 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 ZNF419Q96HQ0 510 aaPredicted RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 NARS2Q96I59 477 aaKnown RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 SLC6A18Q96N87 628 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 TBX5Q99593 518 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 SLC25A31Q9H0C2 315 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 MYO18AQ92614 2054 aaKnown RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 A0A1W2PR48 441 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 XRCC3O43542 346 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 RAD51DO75771 328 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 TBXA2RP21731 343 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 ALAS2P22557 587 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 CD96P40200 585 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 MAN2A2P49641 1150 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 PGFP49763 221 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 ARFRP1Q13795 201 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 SGCBQ16585 318 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 AGBL4Q5VU57 503 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 OPN5Q6U736 354 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 JAGN1Q8N5M9 183 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 FAM83FQ8NEG4 500 aaPredicted RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 FGF13Q92913 245 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 MRPL38Q96DV4 380 aaKnown RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 GAL3ST4Q96RP7 486 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 ARPC5LQ9BPX5 153 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 OR10A5Q9H207 317 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 OR10A2Q9H208 303 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 SIRT3Q9NTG7 399 aaPredicted RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 TVP23AA6NH52 213 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 BLOC1S5-TXNDC5H3BN57 136 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 WRBO00258 174 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 SOX15O60248 233 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 DIRAS3O95661 229 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 BDKRB2P30411 391 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 DCTDP32321 178 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 RGS19P49795 217 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 RPL27P61353 136 aaKnown RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 HERV-K104P61576 105 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 VAMP2P63027 116 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 OPCMLQ14982 345 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 SURF2Q15527 256 aaPredicted RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 ANKRD16Q6P6B7 361 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 LSM14AQ8ND56 463 aaKnown RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 OR51A2Q8NGJ7 313 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 GHSRQ92847 366 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 CNTNAP3BQ96NU0 1288 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 LINC00597Q9H2U6 94 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 EGLN3Q9H6Z9 239 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 SBF1O95248 1867 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 LINC00862A6NCI5 91 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 SMLR1H3BR10 107 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 GJA1P17302 382 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 HTR2CP28335 458 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 EIF2B1Q14232 305 aaKnown RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 EXT1Q16394 746 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 TSSK4Q6SA08 328 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 ZIC5Q96T25 663 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 GSX2Q9BZM3 304 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 METTL7AQ9H8H3 244 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 RARRES3Q9UL19 164 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 CSNK1G3Q9Y6M4 447 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 C7orf66A4D0T2 115 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 NPIPB13A6NJU9 1138 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 C17orf105B2RV13 164 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 NPIPB4C9JG80 1138 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 HCRTR2O43614 444 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 SPARCP09486 303 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 CD22P20273 847 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 SEC13P55735 322 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 EEF1A1P68104 462 aaKnown RBP6.72□□□□□ -1.33
VTA1-202ENST00000367630 SELENBP1Q13228 472 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 SLC25A24Q6NUK1 477 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 FAM110BQ8TC76 370 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 STRADBQ9C0K7 418 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 XKR8Q9H6D3 395 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 POMT2Q9UKY4 750 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 V9GYH0 126 aa6.72□□□□□ -1.33
VTA1-202ENST00000367630 A0A087WUJ7 227 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 A0A0B4J2A0 478 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 GREM1O60565 184 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 ZP3P21754 424 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 IL32P24001 234 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 PEA15Q15121 130 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 LYPD4Q6UWN0 246 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 ZSCAN1Q8NBB4 408 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 OR4K13Q8NH42 304 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 CSF3RQ99062 836 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 DHRS9Q9BPW9 319 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 RAB33BQ9H082 229 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 SPNS1Q9H2V7 528 aa6.71□□□□□ -1.33
VTA1-202ENST00000367630 RGCCQ9H4X1 137 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms