RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FAM78AQ5JUQ0 283 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ARHGAP40Q5TG30 622 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 VASNQ6EMK4 673 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 LILRA6Q6PI73 481 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ADAMTSL4Q6UY14 1074 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TMUB2Q71RG4 321 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 GALNTL5Q7Z4T8 443 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 CD163Q86VB7 1156 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 CSNK1A1LQ8N752 337 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 WDR89Q96FK6 387 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ALG12Q9BV10 488 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SLC6A15Q9H2J7 730 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 Q9N2J8 555 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 PNO1Q9NRX1 252 aaKnown RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 RABL2BQ9UNT1 228 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 MKI67P46013 3256 aaKnown RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 A0A0A6YYC8 382 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 C7orf66A4D0T2 115 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 POM121BA6NF01 834 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 DISC1C4P0D8 188 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 I3L1I5 382 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 BHLHE40O14503 412 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SPINT1O43278 529 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SC5DO75845 299 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 GPANK1O95872 356 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TMIGD3P0DMS9 266 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 M6PRP20645 277 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 MAT1AQ00266 395 aaKnown RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ILF3Q12906 894 aaKnown RBP eCLIP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TUSC1Q2TAM9 212 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 GFOD2Q3B7J2 385 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ARHGAP11BQ3KRB8 267 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 KLHL26Q53HC5 615 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 LIPNQ5VXI9 398 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 BAIAP2L2Q6UXY1 529 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 IQCF2Q8IXL9 164 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 RNF113BQ8IZP6 322 aaKnown RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SHISA5Q8N114 240 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 OR6V1Q8N148 313 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TMEM185AQ8NFB2 350 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 OR51Q1Q8NH59 317 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SLC22A18Q96BI1 424 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 CPNE2Q96FN4 548 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SPACA7Q96KW9 195 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SORCS2Q96PQ0 1159 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SERINC2Q96SA4 455 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TSNAXQ99598 290 aaKnown RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 C7orf50Q9BRJ6 194 aaKnown RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 APOOQ9BUR5 198 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 PTDSS2Q9BVG9 487 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 AICDAQ9GZX7 198 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 OR2S2Q9NQN1 319 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SLCO1C1Q9NYB5 712 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 PTTG3PQ9NZH4 202 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 CKLFQ9UBR5 152 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 POLR1DQ9Y2S0 133 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 MRPS2Q9Y399 296 aaKnown RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 CARNS1A5YM72 827 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 LINC00862A6NCI5 91 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 OR14I1A6ND48 311 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TBX19O60806 448 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 IFNA6P05013 189 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SULT1A3P0DMM9 295 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SULT1A4P0DMN0 295 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ACHEP22303 614 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 PRSS3P35030 304 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TAS2R20P59543 309 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 SEC61A1P61619 476 aaKnown RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 RPS21P63220 83 aaKnown RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 DUSP8Q13202 625 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 MLC1Q15049 377 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TMEM255AQ5JRV8 349 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 FAM122CQ6P4D5 195 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TMEM81Q6P7N7 255 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 LRFN4Q6PJG9 635 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 MAMSTRQ6ZN01 415 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TRILQ7L0X0 811 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ZNF546Q86UE3 836 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 PLPP7Q8NBV4 271 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 HERVK_113Q902F9 699 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 FAM46BQ96A09 425 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 GDF15Q99988 308 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ARPC5LQ9BPX5 153 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 OR8D2Q9GZM6 311 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TREM1Q9NP99 234 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 MEPEQ9NQ76 525 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-203ENST00000358528 ZMIZ1Q9ULJ6 1067 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 DAPP1Q9UN19 280 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 HEBP2Q9Y5Z4 205 aa6.04□□□□□ -1.44
CSDE1-203ENST00000358528 TSPAN11A1L157 253 aa6.03□□□□□ -1.44
CSDE1-203ENST00000358528 C4orf47A7E2U8 309 aa6.03□□□□□ -1.44
CSDE1-203ENST00000358528 GABARAPH6UMI1 98 aa6.03□□□□□ -1.44
CSDE1-203ENST00000358528 P2RX6O15547 441 aa6.03□□□□□ -1.44
CSDE1-203ENST00000358528 MOSPD3O75425 235 aa6.03□□□□□ -1.44
CSDE1-203ENST00000358528 ZFPL1O95159 310 aa6.03□□□□□ -1.44
CSDE1-203ENST00000358528 GPR75O95800 540 aa6.03□□□□□ -1.44
CSDE1-203ENST00000358528 RENP00797 406 aa6.03□□□□□ -1.44
CSDE1-203ENST00000358528 CXCL10P02778 98 aa6.03□□□□□ -1.44
CSDE1-203ENST00000358528 CISD3P0C7P0 127 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms