RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 DEC1Q9P2X7 70 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 KLHDC2Q9Y2U9 406 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TRAV8-7A0A075B6U6 113 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 A0A1W2PP55 124 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ANKRD20A5PA0PJZ0 165 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF879B4DU55 563 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 AIPO00170 330 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 BET1O15155 118 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 FGF17O60258 216 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 HIST1H2ABP04908 130 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 PVRP15151 417 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ITGB8P26012 769 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 HOXD10P28358 340 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ACTC1P68032 377 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ACTA1P68133 377 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 PON3Q15166 354 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 C4orf46Q504U0 113 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 EIPR1Q53HC9 387 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF660Q6AZW8 331 aaPredicted RBP9.29□□□□□ -0.92
PTPRA-203ENST00000356147 TMEM88Q6PEY1 159 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 HIST3H2AQ7L7L0 130 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 OR6V1Q8N148 313 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 GATSQ8NAP1 163 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 OR51S1Q8NGJ8 323 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 OR4C16Q8NGL9 310 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 HIST1H2ACQ93077 130 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ADAT1Q9BUB4 502 aaKnown RBP9.29□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF350Q9GZX5 532 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 SLC6A17Q9H1V8 727 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 MPDZO75970 2070 aa9.29□□□□□ -0.92
PTPRA-203ENST00000356147 LOC100509620A0A075B734 347 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 TMEM272A0A1B0GTI8 110 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 EDDM13A0A1B0GTR0 161 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 CXorf51AA0A1B0GTR3 108 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 BLOC1S5-TXNDC5H3BN57 136 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 PRAF2O60831 178 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 SDC3O75056 442 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 IFNGP01579 166 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 CSN2P05814 226 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 SLC6A6P31641 620 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 RPL35P42766 123 aaKnown RBP9.28□□□□□ -0.92
PTPRA-203ENST00000356147 FHL1Q13642 323 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 B3GNTL1Q67FW5 361 aaPredicted RBP9.28□□□□□ -0.92
PTPRA-203ENST00000356147 SLC6A19Q695T7 634 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 RPL22L1Q6P5R6 122 aaKnown RBP9.28□□□□□ -0.92
PTPRA-203ENST00000356147 TFAP2EQ6VUC0 442 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 DGAT2L6Q6ZPD8 337 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 OVCH1Q7RTY7 1134 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 PAQR7Q86WK9 346 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 FAM71CQ8NEG0 241 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 OR2L8Q8NGY9 312 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 CCL4L1Q8NHW4 92 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 SCARB1Q8WTV0 552 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 GPN1Q9HCN4 374 aaPredicted RBP9.28□□□□□ -0.92
PTPRA-203ENST00000356147 TCF7L1Q9HCS4 588 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 SRA1Q9HD15 236 aaKnown RBP9.28□□□□□ -0.92
PTPRA-203ENST00000356147 LHX6Q9UPM6 363 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 MRPS23Q9Y3D9 190 aaKnown RBP9.28□□□□□ -0.92
PTPRA-203ENST00000356147 A8MXK9 166 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 SLC31A1O15431 190 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 CTSVO60911 334 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 CDC123O75794 336 aaPredicted RBP9.28□□□□□ -0.92
PTPRA-203ENST00000356147 DBIP07108 87 aaKnown RBP9.28□□□□□ -0.92
PTPRA-203ENST00000356147 OR2T7P0C7T2 308 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 CD53P19397 219 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 DRD3P35462 400 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 GK2Q14410 553 aaPredicted RBP9.28□□□□□ -0.92
PTPRA-203ENST00000356147 ADAMTSL4Q6UY14 1074 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 PDZD9Q8IXQ8 264 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 OR2L13Q8N349 312 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 TEX19Q8NA77 164 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 OR51D1Q8NGF3 324 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 OR2T27Q8NH04 317 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 LCN9Q8WX39 176 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 MRPS24Q96EL2 167 aaKnown RBP9.28□□□□□ -0.92
PTPRA-203ENST00000356147 MFFQ9GZY8 342 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 ZCCHC4Q9H5U6 513 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 IKZF2Q9UKS7 526 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 FBXO4Q9UKT5 387 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 GTF2A1LQ9UNN4 478 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 HEATR5AQ86XA9 2040 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 MYO9BQ13459 2157 aa9.28□□□□□ -0.92
PTPRA-203ENST00000356147 CNTRLQ7Z7A1 2325 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 UBE2QL1A1L167 161 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 CCSO14618 274 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 NDUFB6O95139 128 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 ECDO95905 644 aaPredicted RBP9.27□□□□□ -0.92
PTPRA-203ENST00000356147 GTF2F2P13984 249 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 DDX6P26196 483 aaKnown RBP eCLIP9.27□□□□□ -0.925e-18■■■□□ 16.2
PTPRA-203ENST00000356147 ART1P52961 327 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 AP3S2P59780 193 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 TNFRSF17Q02223 184 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 LGALS3BPQ08380 585 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 CNKSR3Q6P9H4 555 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 KIRREL2Q6UWL6 708 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 STAC2Q6ZMT1 411 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 RNF113BQ8IZP6 322 aaKnown RBP9.27□□□□□ -0.92
PTPRA-203ENST00000356147 C10orf53Q8N6V4 93 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 TMIEQ8NEW7 156 aa9.27□□□□□ -0.92
PTPRA-203ENST00000356147 LRRC46Q96FV0 321 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms