RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CDH12P55289 794 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 CLDN17P56750 224 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 RGS8P57771 180 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 IRX1P78414 480 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 NFYCQ13952 458 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 NRF1Q16656 503 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 MS4A18Q3C1V0 323 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 RABL3Q5HYI8 236 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 ALG10BQ5I7T1 473 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 DNM1P46Q6ZS02 220 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 OR1K1Q8NGR3 316 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 SLC38A4Q969I6 547 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 GTPBP3Q969Y2 492 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 TAMM41Q96BW9 452 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 ARHGDIGQ99819 225 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 KAT8Q9H7Z6 458 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 FGFR1OP2Q9NVK5 253 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 PARPBPQ9NWS1 579 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 GMPR2Q9P2T1 348 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 B3GALT5Q9Y2C3 310 aa14.62□□□□□ -0.07
PDLIM7-201ENST00000355572 NSD1Q96L73 2696 aaPredicted RBP14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 A0A087WUJ7 227 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 EVPLLA8MZ36 301 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 TRAF3IP2O43734 574 aaPredicted RBP14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 TBRG1Q3YBR2 411 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 ARMC8Q8IUR7 673 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 C1orf162Q8NEQ5 155 aaPredicted RBP14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 OR6T1Q8NGN1 323 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 OR10A6Q8NH74 314 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 BCL2L2Q92843 193 aaPredicted RBP14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 BDH2Q9BUT1 245 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 ARMC7Q9H6L4 198 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 C12orf10Q9HB07 376 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 CACYBPQ9HB71 228 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 RPS6KB2Q9UBS0 482 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 TESQ9UGI8 421 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 RASD1Q9Y272 281 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 CSPG4Q6UVK1 2322 aa14.61□□□□□ -0.07
PDLIM7-201ENST00000355572 NAV3Q8IVL0 2385 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 A0A096LPE4 126 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 IGHV1-18A0A0C4DH31 117 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 A0A1W2PPZ6 126 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 ATP6V1G2-DDX39BF2Z307 99 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 ANGPT2O15123 496 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 SEC14L2O76054 403 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 TNFRSF1BP20333 461 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 PTAFRP25105 342 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 CYP51A1Q16850 503 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 CLEC12BQ2HXU8 276 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 FAM69AQ5T7M9 428 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 OR7E24Q6IFN5 339 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 SLC22A25Q6T423 547 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 TMEM108Q6UXF1 575 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 LINC00114Q6XXX2 140 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 KRT73Q86Y46 540 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 TMEM123Q8N131 208 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 POMGNT2Q8NAT1 580 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 C11orf65Q8NCR3 313 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 SLC41A3Q96GZ6 507 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 BOD1Q96IK1 185 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 TXNDC15Q96J42 360 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 EMC6Q9BV81 110 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 RABEP2Q9H5N1 569 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 PRDM4Q9UKN5 801 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 ANGPT4Q9Y264 503 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 AMDHD2Q9Y303 409 aa14.6□□□□□ -0.07
PDLIM7-201ENST00000355572 ABCA2Q9BZC7 2435 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 TRAV36DV7A0A075B6V5 113 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 RNF223E7ERA6 249 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 VAMP5O95183 116 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 CELA3BP08861 270 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 TTKP33981 857 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 PCGF2P35227 344 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 ROR2Q01974 943 aaKnown RBP14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 KLF10Q13118 480 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 FAM91A1Q658Y4 838 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 NANOGP8Q6NSW7 305 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 ULK3Q6PHR2 472 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 CALHM3Q86XJ0 350 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 C17orf78Q8N4C9 275 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 VANGL1Q8TAA9 524 aaPredicted RBP14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 OXGR1Q96P68 337 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 OR2M2Q96R28 347 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 MCHR1Q99705 422 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 SPATA5L1Q9BVQ7 753 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 CACNG6Q9BXT2 260 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 NANOGQ9H9S0 305 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 SAR1AQ9NR31 198 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 MED29Q9NX70 200 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 CORO2BQ9UQ03 480 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 MOKQ9UQ07 419 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 TLN2Q9Y4G6 2542 aa14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 ANK3Q12955 4377 aaKnown RBP14.59□□□□□ -0.07
PDLIM7-201ENST00000355572 A0A096LNT2 108 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 CPSF4LA6NMK7 179 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 AIM2O14862 343 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 TMCC2O75069 709 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 FUT4P22083 530 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 ARF1P84077 181 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 GUCY1A3Q02108 690 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms