RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 POU3F3P20264 500 aaPredicted RBP12.71□□□□□ -0.37
TRIO-202ENST00000344204 MOB1BQ7L9L4 216 aa12.71□□□□□ -0.37
TRIO-202ENST00000344204 SUV39H2Q9H5I1 410 aa12.71□□□□□ -0.37
TRIO-202ENST00000344204 MUTYHQ9UIF7 546 aa12.71□□□□□ -0.37
TRIO-202ENST00000344204 SEC14L6B5MCN3 397 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 FIP1L1Q6UN15 594 aaKnown RBP12.71□□□□□ -0.38
TRIO-202ENST00000344204 OR1J2Q8NGS2 313 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 MARVELD3Q96A59 401 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 SLC7A7Q9UM01 511 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 GPR37L1O60883 481 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 CLRN1P58418 232 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 HBG1P69891 147 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 HBG2P69892 147 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 MEF2AQ02078 507 aaPredicted RBP12.71□□□□□ -0.38
TRIO-202ENST00000344204 ZNF789Q5FWF6 425 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 ZNF534Q76KX8 674 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 TRILQ7L0X0 811 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 SAMD7Q7Z3H4 446 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 OR52I2Q8NH67 350 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 MARVELD1Q9BSK0 173 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 GLIS2Q9BZE0 524 aaPredicted RBP12.71□□□□□ -0.38
TRIO-202ENST00000344204 IL26Q9NPH9 171 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 GJD2Q9UKL4 321 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 TBC1D3BA6NDS4 549 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 MTX2O75431 263 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 FPR3P25089 353 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 HAGHQ16775 308 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 TMEM35AQ53FP2 167 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 KCTD11Q693B1 232 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 TOMM20LQ6UXN7 152 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 ZNF808Q8N4W9 903 aaPredicted RBP12.71□□□□□ -0.38
TRIO-202ENST00000344204 SRMSQ9H3Y6 488 aa12.71□□□□□ -0.38
TRIO-202ENST00000344204 ZNF593O00488 134 aaPredicted RBP12.7□□□□□ -0.38
TRIO-202ENST00000344204 PSMB6P28072 239 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 OR9K2Q8NGE7 335 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 LOC100289279A0A1B0GTE1 492 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 LRFN4Q6PJG9 635 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 PARD6AQ9NPB6 346 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 OR6C76A6NM76 312 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 HPNP05981 417 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 PHYHIPQ92561 330 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 TMEM68Q96MH6 324 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 CMTM3Q96MX0 182 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 CSF3RQ99062 836 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 ANKRD61A6NGH8 418 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 LDB2O43679 373 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 PHYHD1Q5SRE7 291 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 OGFOD3Q6PK18 319 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 RNF111Q6ZNA4 994 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 REM2Q8IYK8 340 aaPredicted RBP12.7□□□□□ -0.38
TRIO-202ENST00000344204 ZNF681Q96N22 645 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 EVA1AQ9H8M9 152 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 DPP7Q9UHL4 492 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 HMX2A2RU54 273 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 OPRD1P41143 372 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 RPUSD3Q6P087 351 aaKnown RBP12.7□□□□□ -0.38
TRIO-202ENST00000344204 KHSRPQ92945 711 aaKnown RBP eCLIP12.7□□□□□ -0.383e-6■■■■□ 22
TRIO-202ENST00000344204 ZNF442Q9H7R0 627 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 SDHAF3Q9NRP4 125 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 H7BYZ3 331 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 MPIG6BO95866 241 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 SP2Q02086 613 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 B3GNTL1Q67FW5 361 aaPredicted RBP12.7□□□□□ -0.38
TRIO-202ENST00000344204 DLEU7Q6UYE1 221 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 TMPRSS7Q7RTY8 843 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 RGPD3A6NKT7 1758 aaPredicted RBP12.7□□□□□ -0.38
TRIO-202ENST00000344204 RGPD4Q7Z3J3 1758 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 CCDC163A0A0D9SF12 145 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 TAF1CQ15572 869 aaPredicted RBP12.7□□□□□ -0.38
TRIO-202ENST00000344204 MLIPQ5VWP3 458 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 TP53I13Q8NBR0 393 aaPredicted RBP12.7□□□□□ -0.38
TRIO-202ENST00000344204 UPRTQ96BW1 309 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 TEX37Q96LM6 180 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 ATF6BQ99941 703 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 MED20Q9H944 212 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.7□□□□□ -0.383e-6■■■■■ 38.5
TRIO-202ENST00000344204 EPXP11678 715 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 RAB11AP62491 216 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 SRPXP78539 464 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 SLC17A1Q14916 467 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 LRP10Q7Z4F1 713 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 PHYHIPLQ96FC7 376 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 MYADMQ96S97 322 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 PARP12Q9H0J9 701 aaKnown RBP12.7□□□□□ -0.38
TRIO-202ENST00000344204 SRA1Q9HD15 236 aaKnown RBP12.7□□□□□ -0.38
TRIO-202ENST00000344204 M0QYG6 137 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 SOCS5O75159 536 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 SLC19A1P41440 591 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 ARHGAP19Q14CB8 494 aa12.7□□□□□ -0.38
TRIO-202ENST00000344204 RTL6Q6ICC9 239 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 C2orf42Q9NWW7 574 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 CTSFQ9UBX1 484 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 FAM227AF5H4B4 570 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 PPP6CO00743 305 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 EPHA4P54764 986 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 ALKBH1Q13686 389 aaKnown RBP12.69□□□□□ -0.38
TRIO-202ENST00000344204 OR51Q1Q8NH59 317 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 DVL3Q92997 716 aaPredicted RBP12.69□□□□□ -0.38
TRIO-202ENST00000344204 SH3BGRL2Q9UJC5 107 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 C2orf78A6NCI8 922 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms