RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TMEM204Q9BSN7 226 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 TMEM43Q9BTV4 400 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 FN3KQ9H479 309 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 PPP1R3EQ9H7J1 279 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 MRPS30Q9NP92 439 aaKnown RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 SDR39U1Q9NRG7 319 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 PLSCR4Q9NRQ2 329 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 PPP4R1LQ9P1A2 415 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 SLC39A10Q9ULF5 831 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 ACACBO00763 2458 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 A0A096LPI6 279 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 LDB2O43679 373 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 MITFO75030 526 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 SLC2A2P11168 524 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 G6PDP11413 515 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 NCF1P14598 390 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 FBLP22087 321 aaKnown RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 PRKACGP22612 351 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 AK4P27144 223 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 C21orf33P30042 268 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 SLC6A1P30531 599 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 TLX1P31314 330 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 RPP30P78346 268 aaKnown RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 NFYCQ13952 458 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 RBMS2Q15434 407 aaKnown RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 SNAPC1Q16533 368 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 PLA1AQ53H76 456 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF628Q5EBL2 1059 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 FBXO48Q5FWF7 155 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 TRIQKQ629K1 86 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 CES3Q6UWW8 571 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 DPPA2Q7Z7J5 298 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF595Q8IYB9 648 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 C1orf52Q8N6N3 182 aaKnown RBP6.66□□□□□ -1.34
ZNF540-202ENST00000343599 OR14A16Q8NHC5 309 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 C2CD4CQ8TF44 421 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 LCN9Q8WX39 176 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 KLK6Q92876 244 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 RHBDF1Q96CC6 855 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 PEX11GQ96HA9 241 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 GPR78Q96P69 363 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 OR2M2Q96R28 347 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 MAGIXQ9H6Y5 334 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 TNFRSF12AQ9NP84 129 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 SLC23A2Q9UGH3 650 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 LAMA3Q16787 3333 aa6.66□□□□□ -1.34
ZNF540-202ENST00000343599 IGLV3-32A0A0A0MS00 114 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 CLCA1A8K7I4 914 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 PRRG2O14669 202 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 ALOX12BO75342 701 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 CRTAPO75718 401 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-202ENST00000343599 LY86O95711 162 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 SULT1A3P0DMM9 295 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 SULT1A4P0DMN0 295 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 TMEM11P17152 192 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF10P21506 573 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-202ENST00000343599 CNR1P21554 472 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 HABP2Q14520 560 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-202ENST00000343599 IGFBP7Q16270 282 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 MAPKAPK3Q16644 382 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 KIAA0930Q6ICG6 404 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-202ENST00000343599 ARHGAP11AQ6P4F7 1023 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 METAP1DQ6UB28 335 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-202ENST00000343599 ANKRD46Q86W74 232 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 FAM129CQ86XR2 697 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 LDLRAD3Q86YD5 345 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 CLDN22Q8N7P3 220 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 DNAJB14Q8TBM8 379 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 SLC25A46Q96AG3 418 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 INPP5KQ9BT40 448 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 METTL9Q9H1A3 318 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 OR2AG1Q9H205 316 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 APMAPQ9HDC9 416 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 YARS2Q9Y2Z4 477 aaKnown RBP6.65□□□□□ -1.34
ZNF540-202ENST00000343599 GPR45Q9Y5Y3 372 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 LOC102723532A0A0G2JNH3 316 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 MEX3AA1L020 520 aaKnown RBP6.65□□□□□ -1.34
ZNF540-202ENST00000343599 LRRC14BA6NHZ5 514 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 ACOD1A6NK06 481 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 TMEM150CB9EJG8 249 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF670-ZNF695F2Z2N8 137 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 GTPBP1O00178 669 aaKnown RBP6.65□□□□□ -1.34
ZNF540-202ENST00000343599 UGDHO60701 494 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 PTHP01270 115 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 ZGLP1P0C6A0 271 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 ACP5P13686 325 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 CXCL3P19876 107 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 RBP2P50120 134 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 POM121L1PQ3SYA9 428 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 MRGPRGQ86SM5 289 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 TSPAN33Q86UF1 283 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 CXorf67Q86X51 503 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-202ENST00000343599 FAM86B1Q8N7N1 296 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF511Q8NB15 262 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 SARAFQ96BY9 339 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 DIRAS2Q96HU8 199 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 RIBC2Q9H4K1 309 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 C19orf12Q9NSK7 152 aa6.65□□□□□ -1.34
ZNF540-202ENST00000343599 CHTOPQ9Y3Y2 248 aaKnown RBP6.65□□□□□ -1.34
ZNF540-202ENST00000343599 CHD6Q8TD26 2715 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms