RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 DUSP6Q16828 381 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 OR10K2Q6IF99 312 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 UNQ6126/PRO20091Q6UXV3 157 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 PRSS41Q7RTY9 318 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 AVL9Q8NBF6 648 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 KLHDC7BQ96G42 594 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 WDFY2Q96P53 400 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 INTS14Q96SY0 518 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 BCL2L10Q9HD36 194 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 PPIL1Q9Y3C6 166 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 CNOT1A5YKK6 2376 aaKnown RBP11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 C2orf72A6NCS6 295 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 F8W036 122 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 PRAF2O60831 178 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 HLA-AP01891 365 aaKnown RBP11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 CDK2P24941 298 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 CCR9P51686 369 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 RAP2BP61225 183 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 BLOC1S1P78537 153 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF628Q5EBL2 1059 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 FAM76BQ5HYJ3 339 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 ZBTB37Q5TC79 503 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 IDO2Q6ZQW0 420 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 GLB1L2Q8IW92 636 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 RNF113BQ8IZP6 322 aaKnown RBP11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 GTPBP8Q8N3Z3 284 aaPredicted RBP11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 FBLIM1Q8WUP2 373 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 PPA2Q9H2U2 334 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 EMC7Q9NPA0 242 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 CYSLTR2Q9NS75 346 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 IL20Q9NYY1 176 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 LRIT1Q9P2V4 623 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 CPNE7Q9UBL6 633 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 PRODH2Q9UF12 536 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 CGGBP1Q9UFW8 167 aaPredicted RBP11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 TESQ9UGI8 421 aaKnown RBP11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF346Q9UL40 294 aaKnown RBP11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 NPFFR2Q9Y5X5 522 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 APC2O95996 2303 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 DPM1O60762 260 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 WNT1P04628 370 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 RUNX2Q13950 521 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 YIF1BQ5BJH7 314 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 UBE2NLQ5JXB2 153 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 TEX261Q6UWH6 196 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 GSG1LQ6UXU4 331 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 ADAMTSL4Q6UY14 1074 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 TCTE3Q8IZS6 198 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 PAQR8Q8TEZ7 354 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 FAM3CQ92520 227 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 MRGPRX3Q96LB0 322 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 RNF32Q9H0A6 362 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC6A20Q9NP91 592 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 MAN2C1Q9NTJ4 1040 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 U3KQ87 197 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 A0A1B0GTH9 108 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 PVALBP20472 110 aaPredicted RBP11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 PKLRP30613 574 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 DLSTP36957 453 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 PCBP4P57723 403 aaKnown RBP11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 PRPS1P60891 318 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 BTG1P62324 171 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 FAM74A1Q5RGS3 127 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 SIGIRRQ6IA17 410 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 TSSK4Q6SA08 328 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 RNF165Q6ZSG1 346 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC35F3Q8IY50 421 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 C12orf45Q8N5I9 185 aaPredicted RBP11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 SPPL3Q8TCT6 385 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 DIO2Q92813 273 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 RBP7Q96R05 134 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 NUDT22Q9BRQ3 303 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 PTDSS2Q9BVG9 487 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 PRDM7Q9NQW5 492 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 FBXO9Q9UK97 447 aaPredicted RBP11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 TOR1AO14656 332 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 HTR3BO95264 441 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 MPIG6BO95866 241 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 AKAIN1P0CW23 69 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 THEGLP0DJG4 465 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 POU3F3P20264 500 aaPredicted RBP11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 FGF9P31371 208 aaPredicted RBP11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 IL13RA1P78552 427 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 DUSP2Q05923 314 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 KIR2DS3Q14952 304 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 ST3GAL2Q16842 350 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 TMEM225Q6GV28 225 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 TMEM17Q86X19 198 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 BPIFB2Q8N4F0 458 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 TSTD1Q8NFU3 115 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF417Q8TAU3 575 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 FAM174AQ8TBP5 190 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 FAM71F1Q96KD3 344 aaPredicted RBP11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC6A18Q96N87 628 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 FAM83CQ9BQN1 747 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 TIMM29Q9BSF4 260 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 POLMQ9NP87 494 aaPredicted RBP11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 INPP5EQ9NRR6 644 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 TAS2R8Q9NYW2 309 aa11.44□□□□□ -0.58
SNRNP48-201ENST00000342415 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms