RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 MESP1Q9BRJ9 268 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 SEMA4CQ9C0C4 833 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 TMEM38AQ9H6F2 299 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 FAM86C1Q9NVL1 165 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 ASH2LQ9UBL3 628 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 ZNF292O60281 2723 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 IGHV5-10-1A0A0J9YXX1 117 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 OR6C65A6NJZ3 312 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 AIPO00170 330 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 FGF2P09038 288 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 CT62P0C5K7 136 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 CPEP16870 476 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 PCBP3P57721 371 aaKnown RBP13.84□□□□□ -0.19
BRAT1-201ENST00000340611 EXOSC7Q15024 291 aaKnown RBP13.84□□□□□ -0.19
BRAT1-201ENST00000340611 SYPL1Q16563 259 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 AKIRIN2Q53H80 203 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 TMEM201Q5SNT2 666 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 C12orf73Q69YU5 71 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 LRRN3Q9H3W5 708 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 CTPS2Q9NRF8 586 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 PHF11Q9UIL8 331 aa13.84□□□□□ -0.19
BRAT1-201ENST00000340611 H3BMH7 237 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 L7N2F9 121 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 ARAFP10398 606 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 TLX1P31314 330 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-201ENST00000340611 ZNF528Q3MIS6 628 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 SYT14P1Q58G82 188 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 SLC25A25Q6KCM7 469 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 TCTN3Q6NUS6 607 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 ZNF527Q8NB42 609 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 SLC38A9Q8NBW4 561 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 GPR32P1Q8NGA4 272 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 RHBDD1Q8TEB9 315 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 CCDC74BQ96LY2 380 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 ZNF251Q9BRH9 671 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 RAB33BQ9H082 229 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 DNTTIP1Q9H147 329 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 OR51I1Q9H343 314 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 CUTCQ9NTM9 273 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 GPR52Q9Y2T5 361 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 ZNF749O43361 778 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 TXNL1O43396 289 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 RAB36O95755 333 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 ZNF10P21506 573 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-201ENST00000340611 NT5EP21589 574 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 DRD5P21918 477 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 FPR3P25089 353 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 PRKAR1BP31321 381 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 MPIP34949 423 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 SPEM2Q0P670 501 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 NTRK2Q16620 822 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 PGBD2Q6P3X8 592 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 TMEM71Q6P5X7 295 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 ZNF613Q6PF04 617 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 RELL2Q8NC24 303 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-201ENST00000340611 OR4D11Q8NGI4 311 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 OR6C1Q96RD1 312 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 PTDSS2Q9BVG9 487 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 QRSL1Q9H0R6 528 aaKnown RBP13.83□□□□□ -0.2
BRAT1-201ENST00000340611 ACSS1Q9NUB1 689 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-201ENST00000340611 NDRG3Q9UGV2 375 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 SLC6A5Q9Y345 797 aa13.83□□□□□ -0.2
BRAT1-201ENST00000340611 PCNX2A6NKB5 2137 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 HMGN4O00479 90 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 TBX19O60806 448 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 CXCL2P19875 107 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 CCR6P51684 374 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 LGALS3BPQ08380 585 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 PIN1Q13526 163 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-201ENST00000340611 ALKBH1Q13686 389 aaKnown RBP13.82□□□□□ -0.2
BRAT1-201ENST00000340611 ST3GAL2Q16842 350 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 VWA2Q5GFL6 755 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 TCTE1Q5JU00 501 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 FAM69BQ5VUD6 431 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 ACSM5Q6NUN0 579 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 WDR74Q6RFH5 385 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-201ENST00000340611 FAM198BQ6UWH4 519 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 LRRC25Q8N386 305 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-201ENST00000340611 D2HGDHQ8N465 521 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 OR51Q1Q8NH59 317 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 AP3S1Q92572 193 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 ANKRD9Q96BM1 317 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-201ENST00000340611 NEURL3Q96EH8 262 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 SENP5Q96HI0 755 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-201ENST00000340611 TMED9Q9BVK6 235 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 NEUROD4Q9HD90 331 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 ADAP2Q9NPF8 381 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 OCIAD1Q9NX40 245 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 KCND3Q9UK17 655 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 C5orf58C9J3I9 102 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 CD63P08962 238 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 CPMP14384 443 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 SLC6A1P30531 599 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 EFNA3P52797 238 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 WNT4P56705 351 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 PPP3R1P63098 170 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 GINS1Q14691 196 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 SLC7A13Q8TCU3 470 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 SLC38A5Q8WUX1 472 aa13.82□□□□□ -0.2
BRAT1-201ENST00000340611 CNOT9Q92600 299 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms