RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 DMTNQ08495 405 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 SF3A3Q12874 501 aaKnown RBP eCLIP11.65□□□□□ -0.544e-6■■■□□ 19.1
NUDCD3-201ENST00000338427 FADDQ13158 208 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 RUNDC3AQ59EK9 446 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 CARD17Q5XLA6 110 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 REEP3Q6NUK4 255 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 ANKRD16Q6P6B7 361 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 VHLLQ6RSH7 139 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 MYPOPQ86VE0 399 aaPredicted RBP11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 SMYD1Q8NB12 490 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 C1orf162Q8NEQ5 155 aaPredicted RBP11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 ZNF417Q8TAU3 575 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 TXNDC15Q96J42 360 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 ADAD1Q96M93 576 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 ZNF587Q96SQ5 575 aaPredicted RBP11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 EMC6Q9BV81 110 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 RAD21L1Q9H4I0 556 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 CACYBPQ9HB71 228 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 THUMPD1Q9NXG2 353 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 RPS6KB2Q9UBS0 482 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 RASD1Q9Y272 281 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 RTTNQ86VV8 2226 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 YLPM1P49750 1951 aaKnown RBP11.65□□□□□ -0.55
NUDCD3-201ENST00000338427 CUBNO60494 3623 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 ZNF503-AS2A6NEH8 195 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 SEC14L2O76054 403 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 VAMP5O95183 116 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 WNT11O96014 354 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 ETS2P15036 469 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 ZNF43P17038 809 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 GPX2P18283 190 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 CALCRP30988 508 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 PRKAR1BP31321 381 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 SCARB2Q14108 478 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 OR1Q1Q15612 314 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 ETFDHQ16134 617 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 ZSWIM7Q19AV6 140 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 DHRS4L2Q6PKH6 230 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 SSX8Q7RTT4 187 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 RETREG3Q86VR2 466 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 PTOV1Q86YD1 416 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 RBM45Q8IUH3 476 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 C17orf78Q8N4C9 275 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 OXGR1Q96P68 337 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 ARMC7Q9H6L4 198 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 FKRPQ9H9S5 495 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 ARFGEF3Q5TH69 2177 aa11.64□□□□□ -0.55
NUDCD3-201ENST00000338427 ZNF587BE7ETH6 402 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 M0QX08 132 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 M0R3H8 397 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 CD5LO43866 347 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 MFN2O95140 757 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 OPN1SWP03999 348 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 CDH12P55289 794 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 IL1RL1Q01638 556 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 HGFACQ04756 655 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 C1DQ13901 141 aaKnown RBP11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 DUSP7Q16829 419 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 SWI5Q1ZZU3 235 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 ALG10BQ5I7T1 473 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 HMBOX1Q6NT76 420 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 ZNF544Q6NX49 715 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 KLHL24Q6TFL4 600 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 NHLRC1Q6VVB1 395 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 H1FNTQ75WM6 255 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 LSMEM1Q8N8F7 131 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 ANKS4BQ8N8V4 417 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 OR4D11Q8NGI4 311 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 DYDC1Q8WWB3 177 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 CKAP2Q8WWK9 683 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 MOGAT1Q96PD6 335 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 SLC38A2Q96QD8 506 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 CPPED1Q9BRF8 314 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 PIF1Q9H611 641 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 BARX1Q9HBU1 254 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 GPR35Q9HC97 309 aa11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 CHD3Q12873 2000 aaKnown RBP11.63□□□□□ -0.55
NUDCD3-201ENST00000338427 TRAV36DV7A0A075B6V5 113 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 M0R3G1 203 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 BGLAPP02818 100 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 TP53P04637 393 aaPredicted RBP11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 CECR9P0C854 216 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 SLC6A2P23975 617 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 MTPNP58546 118 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 UBE2NP61088 152 aaKnown RBP11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 NAAAQ02083 359 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 SQLEQ14534 574 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 NRF1Q16656 503 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 CEACAM16Q2WEN9 425 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 C6orf89Q6UWU4 347 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 TSPYL5Q86VY4 417 aaPredicted RBP11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 ZCCHC24Q8N2G6 241 aaKnown RBP11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 GPR32P1Q8NGA4 272 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 SLC38A4Q969I6 547 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 BOD1Q96IK1 185 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 SORCS2Q96PQ0 1159 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 OR2M2Q96R28 347 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 LINC00470Q9BZP3 86 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 TMEM27Q9HBJ8 222 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms