RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 TNFP01375 233 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 TMIGD3P0DMS9 266 aaPredicted RBP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 ATF4P18848 351 aaPredicted RBP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 FCARP24071 287 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 CCKBRP32239 447 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 PSG6Q00889 435 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 C4orf46Q504U0 113 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 PRAMEF17Q5VTA0 474 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 LIPNQ5VXI9 398 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 CBLN3Q6UW01 205 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 ALKAL2Q6UX46 152 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 Q6ZTK2 550 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 TMPRSS11FQ6ZWK6 438 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 SLITRK4Q8IW52 837 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 BOLLQ8N9W6 283 aaKnown RBP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 PGLYRP3Q96LB9 341 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 SYT4Q9H2B2 425 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 NRIP3Q9NQ35 241 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 V9GY05 133 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 A0A0B4J2E0 115 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 A0A1B0GX12 115 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 FAM25EA8MYX2 175 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 TSFMP43897 325 aaKnown RBP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 ACTA2P62736 377 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 ACTG2P63267 376 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 PCGF3Q3KNV8 242 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 OR5AK2Q8NH90 309 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 KCTD12Q96CX2 325 aaKnown RBP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 NXPE2Q96DL1 559 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 MRGPRX1Q96LB2 322 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 TIMP4Q99727 224 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 MAP3K3Q99759 626 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 ZC4H2Q9NQZ6 224 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 FARSAQ9Y285 508 aaKnown RBP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 PIAS3Q9Y6X2 628 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 KIF26AQ9ULI4 1882 aaPredicted RBP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 TRAV18A0A075B6X5 111 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 H0YC42 278 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 CDC40O60508 579 aaKnown RBP eCLIP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 OR2T7P0C7T2 308 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 TPMTP51580 245 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 FOXL2P58012 376 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 GRK1Q15835 563 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 SLC36A2Q495M3 483 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 ALG10Q5BKT4 473 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 TOR2AQ5JU69 321 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 ZNF550Q7Z398 422 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 MCATQ8IVS2 390 aaKnown RBP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 OR2T27Q8NH04 317 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 OR10AC1Q8NH08 325 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 TMEM106AQ96A25 262 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 MRPL48Q96GC5 212 aaKnown RBP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 ZNF764Q96H86 408 aaPredicted RBP10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 SYNDIG1Q9H7V2 258 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 C14orf105Q9NVL8 296 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 COL4A3Q01955 1670 aa10.81□□□□□ -0.68
EFCAB13-201ENST00000331493 IFNA7P01567 189 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 SPARCP09486 303 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 RNH1P13489 461 aaKnown RBP10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 PSMB1P20618 241 aaKnown RBP10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 PTH2RP49190 550 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 FNTBP49356 437 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 EXOSC2Q13868 293 aaKnown RBP10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 TRAM1Q15629 374 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 TMEM255AQ5JRV8 349 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 ZBTB37Q5TC79 503 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 DMKNQ6E0U4 476 aaPredicted RBP10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 LRRN1Q6UXK5 716 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 TRILQ7L0X0 811 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 OR51D1Q8NGF3 324 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 C16orf52Q8NHV5 167 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 SOSTQ9BQB4 213 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 C2orf42Q9NWW7 574 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 KLHL9Q9P2J3 617 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 KNTC1P50748 2209 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 A0A0J9YY10 115 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 XKRYO14609 159 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 PEX14O75381 377 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 OPN1LWP04000 364 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 THEGLP0DJG4 465 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 CDK2P24941 298 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 TCTE1Q5JU00 501 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 HLA-DQA1Q5Y7H0 255 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 TEX261Q6UWH6 196 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 TTLL10Q6ZVT0 673 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 ADAMTS14Q8WXS8 1223 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 PPP1R14AQ96A00 147 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 ZC3HAV1LQ96H79 300 aaKnown RBP10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 NARS2Q96I59 477 aaKnown RBP10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 MOGAT1Q96PD6 335 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 OR2M2Q96R28 347 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 SLC38A3Q99624 504 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 NARFLQ9H6Q4 476 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 DNAJB12Q9NXW2 375 aaKnown RBP10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 GLTPQ9NZD2 209 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 U3KQ87 197 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 SPTBN5Q9NRC6 3674 aaKnown RBP10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 A0A1B0GVI7 797 aa10.8□□□□□ -0.68
EFCAB13-201ENST00000331493 DCDC2BA2VCK2 349 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms