RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 GPLD1P80108 840 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 SORDQ00796 357 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 HYAL4Q2M3T9 481 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 OR7E24Q6IFN5 339 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 OR5T3Q8NGG3 340 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 OR1E3Q8WZA6 343 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 SFXN2Q96NB2 322 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 PRDM9Q9NQV7 894 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 TRIM64BA6NI03 449 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 FGF17O60258 216 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 S100A11P31949 105 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 MFSD13AQ14CX5 517 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 CDK5R1Q15078 307 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 OR4D11Q8NGI4 311 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 RBPMSQ93062 196 aaKnown RBP13.59□□□□□ -0.23
TCOF1-201ENST00000323668 ZBTB8AQ96BR9 441 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 ATXN7L1Q9ULK2 861 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-201ENST00000323668 MRPS17Q9Y2R5 130 aaKnown RBP13.59□□□□□ -0.23
TCOF1-201ENST00000323668 GPR55Q9Y2T6 319 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-201ENST00000323668 PRAMEF26H0Y7S4 382 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 GCM2O75603 506 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-201ENST00000323668 SCGB1D2O95969 90 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 FBLP22087 321 aaKnown RBP13.58□□□□□ -0.24
TCOF1-201ENST00000323668 TRHRP34981 398 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-201ENST00000323668 CYCSP99999 105 aaKnown RBP13.58□□□□□ -0.24
TCOF1-201ENST00000323668 SQSTM1Q13501 440 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 ZNF79Q15937 498 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 AADACL4Q5VUY2 407 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 FOXN4Q96NZ1 517 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 MIXL1Q9H2W2 232 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 PLXNB2O15031 1838 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 A0A0B4J203 849 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 DIO1P49895 249 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 P2RX3P56373 397 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 LIPNQ5VXI9 398 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 ARSKQ6UWY0 536 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 DUSP18Q8NEJ0 188 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 OR8D4Q8NGM9 314 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 ZC3H10Q96K80 434 aaKnown RBP13.58□□□□□ -0.24
TCOF1-201ENST00000323668 PRRT1Q99946 306 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 CHMP1AQ9HD42 196 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-201ENST00000323668 ADAM18Q9Y3Q7 739 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 SYT7O43581 403 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 AMY2BP19961 511 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 DLSTP36957 453 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 RFX2P48378 723 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 CEBPGP53567 150 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 UBXN2BQ14CS0 331 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 SLC25A35Q3KQZ1 300 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 TMEM244Q5VVB8 128 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 KANSL1Q7Z3B3 1105 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 BPIFB2Q8N4F0 458 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 TMEM185AQ8NFB2 350 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 OR51D1Q8NGF3 324 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 ASB17Q8WXJ9 295 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 SLC6A20Q9NP91 592 aa13.58□□□□□ -0.24
TCOF1-201ENST00000323668 VSTM2BA6NLU5 285 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 SCGNO76038 276 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 MEF2DQ14814 521 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 SLC35D2Q76EJ3 337 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 PTGES2Q9H7Z7 377 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 FBXL2Q9UKC9 423 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 SLC22A7Q9Y694 548 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 TMEM82A0PJX8 343 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 EPXP11678 715 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 IL13RA1P78552 427 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 EEF1A2Q05639 463 aaKnown RBP13.57□□□□□ -0.24
TCOF1-201ENST00000323668 MANEAQ5SRI9 462 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 NECAB3Q96P71 396 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-201ENST00000323668 TEX101Q9BY14 249 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 WDR76Q9H967 626 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 EXO1Q9UQ84 846 aaKnown RBP13.57□□□□□ -0.24
TCOF1-201ENST00000323668 TP53P04637 393 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-201ENST00000323668 ZBTB37Q5TC79 503 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 CFAP77Q6ZQR2 320 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 PXKQ7Z7A4 578 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 CMTM4Q8IZR5 234 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 LINC01555Q8NAE3 123 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 PHOSPHO2Q8TCD6 241 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 OR10A5Q9H207 317 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 FBXO9Q9UK97 447 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-201ENST00000323668 ZNF705EA8MWA4 302 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-201ENST00000323668 TEX46H3BTG2 121 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 CLUP10909 449 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 LIPCP11150 499 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 TACR3P29371 465 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 KIAA1024LP59773 190 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 YPEL5P62699 121 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 MAT1AQ00266 395 aaKnown RBP13.57□□□□□ -0.24
TCOF1-201ENST00000323668 SPOCK1Q08629 439 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 ZXDCQ2QGD7 858 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-201ENST00000323668 CHRFAM7AQ494W8 412 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 TMPRSS9Q7Z410 1059 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 CD163Q86VB7 1156 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 ZFPM2Q8WW38 1151 aa13.57□□□□□ -0.24
TCOF1-201ENST00000323668 PCM1Q15154 2024 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 PIKFYVEQ9Y2I7 2098 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 BLACEA4D250 179 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 PVALBP20472 110 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-201ENST00000323668 ARHGDIBP52566 201 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms