RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 WISP1O95388 367 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 IGHMP01871 453 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 IDUAP35475 653 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 LSM3P62310 102 aaKnown RBP16.12■□□□□ 0.17
RAB39A-201ENST00000320578 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.12■□□□□ 0.17
RAB39A-201ENST00000320578 GXYLT1Q4G148 440 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 OR2G6Q5TZ20 316 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 SLC22A10Q63ZE4 541 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 POMZP3Q6PJE2 187 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 ZNF322Q6U7Q0 402 aaPredicted RBP16.12■□□□□ 0.17
RAB39A-201ENST00000320578 PLCZ1Q86YW0 608 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 EGFL6Q8IUX8 553 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 EXD3Q8N9H8 876 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 WDSUB1Q8N9V3 476 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 TM9SF4Q92544 642 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 ZBTB8AQ96BR9 441 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 Q96M85 177 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 NMNAT3Q96T66 252 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 DCSTAMPQ9H295 470 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 KLHL1Q9NR64 748 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 SPIN1Q9Y657 262 aaPredicted RBP16.12■□□□□ 0.17
RAB39A-201ENST00000320578 A3GALT2U3KPV4 340 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 MYO15AQ9UKN7 3530 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 DMDP11532 3685 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 OR6C68A6NDL8 312 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 NPIPB13A6NJU9 1138 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.12■□□□□ 0.17
RAB39A-201ENST00000320578 NPIPB4C9JG80 1138 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 STMND1H3BQB6 276 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 PLPP3O14495 311 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 GRPRP30550 384 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 DLSTP36957 453 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 CDKN2AP42771 156 aaKnown RBP16.12■□□□□ 0.17
RAB39A-201ENST00000320578 Q0VFX4 171 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 FOXF1Q12946 379 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 MOGQ16653 247 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 ADCK1Q86TW2 530 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 TMEM156Q8N614 296 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 LSM14AQ8ND56 463 aaKnown RBP16.12■□□□□ 0.17
RAB39A-201ENST00000320578 OR4K17Q8NGC6 315 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 GATAD2BQ8WXI9 593 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 UFD1Q92890 307 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 RASD2Q96D21 266 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 FANCFQ9NPI8 374 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 INIPQ9NRY2 104 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 HPF1Q9NWY4 346 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 FRYLO94915 3013 aa16.12■□□□□ 0.17
RAB39A-201ENST00000320578 DAPL1A0PJW8 107 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 GLCEO94923 617 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 SNX4O95219 450 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 OR2T7P0C7T2 308 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 CLUP10909 449 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 SPI1P17947 270 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 CRYBB2P43320 205 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 TMPRSS12Q86WS5 348 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 OR2T27Q8NH04 317 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 POC1BQ8TC44 478 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 SLC25A43Q8WUT9 341 aaPredicted RBP16.11■□□□□ 0.17
RAB39A-201ENST00000320578 SMPDL3BQ92485 455 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 TSPAN32Q96QS1 320 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 CNN2Q99439 309 aaKnown RBP16.11■□□□□ 0.17
RAB39A-201ENST00000320578 COQ7Q99807 217 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 HRH3Q9Y5N1 445 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 OTOGLQ3ZCN5 2332 aa16.11■□□□□ 0.17
RAB39A-201ENST00000320578 SNPHO15079 494 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 GPX5O75715 221 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 F13BP05160 661 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 GAAP10253 952 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 CD53P19397 219 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 GALP22466 123 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 SLC16A1P53985 500 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 KRR1Q13601 381 aaKnown RBP16.1■□□□□ 0.17
RAB39A-201ENST00000320578 LEG1Q6P5S2 330 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 ARIH2OSQ8N7S6 290 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 TMEM99Q8N816 258 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 SLC25A36Q96CQ1 311 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 TMEM41AQ96HV5 264 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 TIMP4Q99727 224 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 CHCHD6Q9BRQ6 235 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 ALG8Q9BVK2 526 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 OR11A1Q9GZK7 315 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 TXNIPQ9H3M7 391 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 PROK2Q9HC23 129 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 ASB6Q9NWX5 421 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 BABAM2Q9NXR7 383 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 CCDC59Q9P031 241 aaKnown RBP16.1■□□□□ 0.17
RAB39A-201ENST00000320578 ZNF346Q9UL40 294 aaKnown RBP16.1■□□□□ 0.17
RAB39A-201ENST00000320578 VDAC3Q9Y277 283 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 SF3B6Q9Y3B4 125 aaKnown RBP16.1■□□□□ 0.17
RAB39A-201ENST00000320578 PCNX2A6NKB5 2137 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 TRIM3O75382 744 aaPredicted RBP16.1■□□□□ 0.17
RAB39A-201ENST00000320578 OR6A2O95222 327 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 FTH1P19P0C7X4 201 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 F8A1P23610 371 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 GABRA5P31644 462 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 CENPAP49450 140 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 RPL27P61353 136 aaKnown RBP16.1■□□□□ 0.17
RAB39A-201ENST00000320578 HSF2Q03933 536 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 LINC01590Q5TEZ4 76 aa16.1■□□□□ 0.17
RAB39A-201ENST00000320578 LIPKQ5VXJ0 399 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms