RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ADAM12O43184 909 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 PAPLNO95428 1278 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 LAP3P28838 519 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 TACR3P29371 465 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 TSFMP43897 325 aaKnown RBP12.72□□□□□ -0.37
CLCN6-201ENST00000312413 PRLHRP49683 370 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 CASP6P55212 293 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 OXA1LQ15070 435 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 ADAM5Q6NVV9 412 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 LPCAT3Q6P1A2 487 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 LANCL3Q6ZV70 420 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 WDR5BQ86VZ2 330 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 HSD17B11Q8NBQ5 300 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 OR52N1Q8NH53 320 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 C14orf79Q96F83 325 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 MCTS1Q9ULC4 181 aaKnown RBP12.72□□□□□ -0.37
CLCN6-201ENST00000312413 MED16Q9Y2X0 877 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 TIMP2P16035 220 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 MAKP20794 623 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 HCCSP53701 268 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 MTCP1P56278 107 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 HNF4GQ14541 408 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 CLINT1Q14677 625 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 SLC35D2Q76EJ3 337 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 SELENOIQ9C0D9 397 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 C1orf198Q9H425 327 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 STARD5Q9NSY2 213 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 MYH11P35749 1972 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 PARP4Q9UKK3 1724 aaKnown RBP12.71□□□□□ -0.37
CLCN6-201ENST00000312413 ROBO1Q9Y6N7 1651 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 A0A087WUU8 490 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 A6NL46 340 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 TXNDC12O95881 172 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 HLA-HP01893 362 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 FCGR2AP12318 317 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 FOLR1P15328 257 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 ADRA1AP35348 466 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 CD300LGQ6UXG3 332 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 Q6ZTK2 550 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 FRMD1Q8N878 549 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 TNFRSF13CQ96RJ3 184 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 ULBP2Q9BZM5 246 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 ENKD1Q9H0I2 346 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 EXO1Q9UQ84 846 aaKnown RBP12.71□□□□□ -0.37
CLCN6-201ENST00000312413 MRPS28Q9Y2Q9 187 aaKnown RBP12.71□□□□□ -0.37
CLCN6-201ENST00000312413 MGST1P10620 155 aaKnown RBP12.71□□□□□ -0.37
CLCN6-201ENST00000312413 PIGAP37287 484 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 F2RL1P55085 397 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 MCATQ8IVS2 390 aaKnown RBP12.71□□□□□ -0.37
CLCN6-201ENST00000312413 OR10Z1Q8NGY1 313 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 NANPQ8TBE9 248 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 NKX6-2Q9C056 277 aaPredicted RBP12.71□□□□□ -0.37
CLCN6-201ENST00000312413 KPTNQ9Y664 436 aa12.71□□□□□ -0.37
CLCN6-201ENST00000312413 PRSS44E7EML9 344 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 DDAH2O95865 285 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 ATXN1LP0C7T5 689 aaKnown RBP12.71□□□□□ -0.38
CLCN6-201ENST00000312413 ZNF728P0DKX0 622 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 SMIM18P0DKX4 95 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 ELAVL4P26378 380 aaKnown RBP12.71□□□□□ -0.38
CLCN6-201ENST00000312413 BLVRBP30043 206 aaPredicted RBP12.71□□□□□ -0.38
CLCN6-201ENST00000312413 TRHRP34981 398 aaPredicted RBP12.71□□□□□ -0.38
CLCN6-201ENST00000312413 P2RY2P41231 377 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 TLE1Q04724 770 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 RNLSQ5VYX0 342 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 MAVSQ7Z434 540 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 MRPL10Q7Z7H8 261 aaKnown RBP12.71□□□□□ -0.38
CLCN6-201ENST00000312413 NIPSNAP1Q9BPW8 284 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 PPP1R14DQ9NXH3 145 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 NPFFR2Q9Y5X5 522 aa12.71□□□□□ -0.38
CLCN6-201ENST00000312413 BLACEA4D250 179 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 AIFM1O95831 613 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 MT-ND4LP03901 98 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 CSNK1DP48730 415 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 FLI1Q01543 452 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-201ENST00000312413 PDZK1IP1Q13113 114 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 CAMK2BQ13554 666 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 SLX4IPQ5VYV7 408 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 Q6ZSR9 355 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 ZNF534Q76KX8 674 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 FKRPQ9H9S5 495 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 STEAP1Q9UHE8 339 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 MYH2Q9UKX2 1941 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 M0QYG6 137 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 TGFBR3Q03167 851 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 PRDX1Q06830 199 aaKnown RBP12.7□□□□□ -0.38
CLCN6-201ENST00000312413 CRMP1Q14194 572 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 TMEM201Q5SNT2 666 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 OGFOD3Q6PK18 319 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 ADGRF3Q8IZF5 1079 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 CRYGNQ8WXF5 182 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 NKX3-1Q99801 234 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-201ENST00000312413 WDR76Q9H967 626 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 SLC23A2Q9UGH3 650 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 MCRIP1C9JLW8 97 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 ARSAP15289 507 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 SPI1P17947 270 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 PTGER4P35408 488 aa12.7□□□□□ -0.38
CLCN6-201ENST00000312413 RPS19P39019 145 aaKnown RBP12.7□□□□□ -0.38
CLCN6-201ENST00000312413 BDH1Q02338 343 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms