RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 GPR39O43194 453 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 TNFSF14O43557 240 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 GPR137BO60478 399 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 SCO1O75880 301 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 PTHP01270 115 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 PNMTP11086 282 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 CD53P19397 219 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 CPT2P23786 658 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 TLE4Q04727 773 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 TRIP6Q15654 476 aaKnown RBP7.61□□□□□ -1.19
VPS41-202ENST00000310301 NHSL2Q5HYW2 709 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 SIAH3Q8IW03 269 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 LILRA2Q8N149 483 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 DEFB124Q8NES8 71 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 OR6F1Q8NGZ6 308 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 TMEM239Q8WW34 195 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 KCNE4Q8WWG9 221 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 DAZAP1Q96EP5 407 aaKnown RBP7.61□□□□□ -1.19
VPS41-202ENST00000310301 ZNF768Q9H5H4 540 aaKnown RBP7.61□□□□□ -1.19
VPS41-202ENST00000310301 TAAR2Q9P1P5 351 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 GPR45Q9Y5Y3 372 aa7.61□□□□□ -1.19
VPS41-202ENST00000310301 FAM183AA6NL82 134 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 RNASET2O00584 256 aaKnown RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 MSTNO14793 375 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 SBK2P0C263 348 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 GIPRP48546 466 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 RPS18P62269 152 aaKnown RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 ZNF91Q05481 1191 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 DLX2Q07687 328 aaPredicted RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 ZNF252P-AS1Q0IIN9 211 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 TMEM35AQ53FP2 167 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 SFRP5Q5T4F7 317 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 B3GLCTQ6Y288 498 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 NLRC3Q7RTR2 1065 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 RETREG3Q86VR2 466 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 HAVCR2Q8TDQ0 301 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 C3orf30Q96M34 536 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 NIPSNAP3BQ9BS92 247 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 EMCNQ9ULC0 261 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 CXorf51AA0A1B0GTR3 108 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 CDHR4A6H8M9 788 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 SCG5P05408 212 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 C1SP09871 688 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 OR13C7P0DN81 318 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 OMGP23515 440 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 CPOXP36551 454 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 DAPP51397 102 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 OR52W1Q6IF63 320 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 FRMPD2BQ6IN97 320 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 PODNL1Q6PEZ8 512 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 C17orf107Q6ZR85 190 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 TMPPEQ6ZT21 453 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 SEMA4GQ9NTN9 838 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 PADI1Q9ULC6 663 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 TMEM235A6NFC5 223 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 METTL15A6NJ78 407 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 HBE1P02100 147 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 C1QBP02746 253 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 CPN1P15169 458 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 ZNF44P15621 663 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 SPOCK1Q08629 439 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 COL9A2Q14055 689 aaPredicted RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 ZNF74Q16587 644 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 PLK5Q496M5 336 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 RAB6CQ53S08 254 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 ZNF789Q5FWF6 425 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 KDELC1Q6UW63 502 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 PAQR9Q6ZVX9 377 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 HIST2H3AQ71DI3 136 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 CBLL1Q75N03 491 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 MCATQ8IVS2 390 aaKnown RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 SLC7A6Q92536 515 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 MAP3K3Q99759 626 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 NAA11Q9BSU3 229 aaPredicted RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 C1QTNF2Q9BXJ5 285 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 RAB6CQ9H0N0 254 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 C6orf106Q9H6K1 298 aaPredicted RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 INPP5EQ9NRR6 644 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 MRPL22Q9NWU5 206 aaKnown RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 VSTM2BA6NLU5 285 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 H3BUI4 141 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 H7C1Q1 480 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 ARNTLO00327 626 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 SOCS6O14544 535 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 MBP02144 154 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 RNH1P13489 461 aaKnown RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 IMPA1P29218 277 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 SELENOVP59797 346 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 HEPHL1Q6MZM0 1159 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 SBSNQ6UWP8 590 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 RBMS3Q6XE24 437 aaKnown RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 SLC46A3Q7Z3Q1 461 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 OR5D14Q8NGL3 314 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 IFI44Q8TCB0 444 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 PRRC1Q96M27 445 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 FYTTD1Q96QD9 318 aaKnown RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 DPH7Q9BTV6 452 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 DHRS4Q9BTZ2 278 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 PSORS1C1Q9UIG5 152 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 KLK4Q9Y5K2 254 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms