RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ACTC1P68032 377 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 ACTA1P68133 377 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 QRFPP83859 136 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 SRSF3P84103 164 aaKnown RBP4.96□□□□□ -1.61
VPS50-202ENST00000305866 MRPL28Q13084 256 aaKnown RBP4.96□□□□□ -1.61
VPS50-202ENST00000305866 RUNX3Q13761 415 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 ZMYND11Q15326 602 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 DUSP5Q16690 384 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.96□□□□□ -1.61
VPS50-202ENST00000305866 FAM69AQ5T7M9 428 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 BICRALQ6AI39 1079 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 FAAP20Q6NZ36 180 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 MZT2AQ6P582 158 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 ARSKQ6UWY0 536 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 TMUB2Q71RG4 321 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 TRMT11Q7Z4G4 463 aaKnown RBP4.96□□□□□ -1.61
VPS50-202ENST00000305866 CDH26Q8IXH8 852 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 LRRC25Q8N386 305 aaPredicted RBP4.96□□□□□ -1.61
VPS50-202ENST00000305866 PRSS35Q8N3Z0 413 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 CLEC1AQ8NC01 280 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 C19orf18Q8NEA5 215 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 OR2T33Q8NG76 320 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 OR5M1Q8NGP8 315 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 LYPD6BQ8NI32 183 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 RNF138Q8WVD3 245 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 DPYSL5Q9BPU6 564 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 ZNF559Q9BR84 538 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 APOOQ9BUR5 198 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 MRPS30Q9NP92 439 aaKnown RBP4.96□□□□□ -1.61
VPS50-202ENST00000305866 KRCC1Q9NPI7 259 aaPredicted RBP4.96□□□□□ -1.61
VPS50-202ENST00000305866 PHPT1Q9NRX4 125 aaPredicted RBP4.96□□□□□ -1.61
VPS50-202ENST00000305866 ZNF337Q9Y3M9 751 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 HS3ST3A1Q9Y663 406 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 OR14I1A6ND48 311 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 PRAF2O60831 178 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 GATBO75879 557 aaKnown RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 WDPCPO95876 746 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 ANXA7P20073 488 aaKnown RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 XPAP23025 273 aaPredicted RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 CMPK1P30085 196 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 MC3RP41968 323 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 SLC25A1P53007 311 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 SEC61A1P61619 476 aaKnown RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 TGM3Q08188 693 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 ZNF267Q14586 743 aaPredicted RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 ALG11Q2TAA5 492 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 FNDC3BQ53EP0 1204 aaKnown RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 ZNF311Q5JNZ3 666 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 SLC22A10Q63ZE4 541 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 OR6V1Q8N148 313 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 POMGNT2Q8NAT1 580 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 OR51G2Q8NGK0 314 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 OR9A2Q8NGT5 310 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 LILRB1Q8NHL6 650 aaPredicted RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 TEX47Q8TBZ9 253 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 SKA2Q8WVK7 121 aaPredicted RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 ASB13Q8WXK3 278 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 CDS1Q92903 461 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 ANKRD9Q96BM1 317 aaPredicted RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 MACROD1Q9BQ69 325 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 RAB33BQ9H082 229 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 SEBOXQ9HB31 216 aaPredicted RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 NRIP3Q9NQ35 241 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 UCKL1Q9NWZ5 548 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 ZNF230Q9UIE0 474 aaPredicted RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 FBXL2Q9UKC9 423 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 COLEC10Q9Y6Z7 277 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 TRAV8-7A0A075B6U6 113 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 P2RX6O15547 441 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 SULT1B1O43704 296 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 OR1F1O43749 312 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 IFNA7P01567 189 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 IL2RAP01589 272 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 CD74P04233 296 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 HEXAP06865 529 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 CPMP14384 443 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 RAB3BP20337 219 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 ZNF81P51508 661 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 ADPRHP54922 357 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 BTN1A1Q13410 526 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 HTR4Q13639 388 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 SPOUT1Q5T280 376 aaKnown RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 ZNF776Q68DI1 518 aaPredicted RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 DHRS7BQ6IAN0 325 aaPredicted RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 MTFR2Q6P444 385 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 LINGO2Q7L985 606 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 CEACAM19Q7Z692 300 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 MUC20Q8N307 709 aaPredicted RBP4.96□□□□□ -1.62
VPS50-202ENST00000305866 CDRT4Q8N9R6 151 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 OR4A4PQ8NGN8 299 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 OR13C2Q8NGS9 318 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 ADAMTS18Q8TE60 1221 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 RIT1Q92963 219 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 NTNG2Q96CW9 530 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 OR14A2Q96R54 314 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 DPH1Q9BZG8 443 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 ACTR6Q9GZN1 396 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 RNF208Q9H0X6 261 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 ZDHHC4Q9NPG8 344 aa4.96□□□□□ -1.62
VPS50-202ENST00000305866 ZCCHC3Q9NUD5 404 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms