RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 CAPZBP47756 277 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 RRAS2P62070 204 aaPredicted RBP12.96□□□□□ -0.33
RAB40A-201ENST00000304236 ELOCQ15369 112 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 KLHL26Q53HC5 615 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 WBP2NLQ6ICG8 309 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 RPTNQ6XPR3 784 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 NAXDQ8IW45 347 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 ZNF527Q8NB42 609 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 NPEPL1Q8NDH3 523 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 TRIM63Q969Q1 353 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 C3orf49Q96BT1 292 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 PELI1Q96FA3 418 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 DDOQ99489 341 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 MAP3K3Q99759 626 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 TMEM246Q9BRR3 403 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 NMNAT2Q9BZQ4 307 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 GAREM1Q9H706 876 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 PAQR5Q9NXK6 330 aaPredicted RBP12.96□□□□□ -0.33
RAB40A-201ENST00000304236 CACNG2Q9Y698 323 aa12.96□□□□□ -0.33
RAB40A-201ENST00000304236 TDRD6O60522 2096 aaKnown RBP12.96□□□□□ -0.33
RAB40A-201ENST00000304236 H0YIG0 161 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 CDC123O75794 336 aaPredicted RBP12.96□□□□□ -0.34
RAB40A-201ENST00000304236 UBL3O95164 117 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 IFNA16P05015 189 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 ZNF883P0CG24 379 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 GRK6P43250 576 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 PGDP52209 483 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 RPS4XP62701 263 aaKnown RBP12.96□□□□□ -0.34
RAB40A-201ENST00000304236 BTG2P78543 158 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 MAT1AQ00266 395 aaKnown RBP12.96□□□□□ -0.34
RAB40A-201ENST00000304236 SLC25A35Q3KQZ1 300 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 IL20RBQ6UXL0 311 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 UNQ9370/PRO34162Q6UXP9 181 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 GLCCI1Q86VQ1 547 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 GPR135Q8IZ08 494 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 ARL14Q8N4G2 192 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 YIPF7Q8N8F6 280 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 FAM71CQ8NEG0 241 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 C1orf216Q8TAB5 229 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 SMAP2Q8WU79 429 aaPredicted RBP12.96□□□□□ -0.34
RAB40A-201ENST00000304236 LIPHQ8WWY8 451 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 MMABQ96EY8 250 aaPredicted RBP12.96□□□□□ -0.34
RAB40A-201ENST00000304236 CHRNA10Q9GZZ6 450 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 ABCG5Q9H222 651 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 MSRB2Q9Y3D2 182 aa12.96□□□□□ -0.34
RAB40A-201ENST00000304236 OR6C70A6NIJ9 312 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 ELOA3DA6NLF2 546 aaPredicted RBP12.95□□□□□ -0.34
RAB40A-201ENST00000304236 ZNF879B4DU55 563 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 GNB5O14775 395 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 GLCEO94923 617 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 DHFRP00374 187 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 C1QBP02746 253 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 EPXP11678 715 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 APEHP13798 732 aaKnown RBP12.95□□□□□ -0.34
RAB40A-201ENST00000304236 SPI1P17947 270 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 EDNRAP25101 427 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 AFF3P51826 1226 aaKnown RBP12.95□□□□□ -0.34
RAB40A-201ENST00000304236 MAZP56270 477 aaKnown RBP12.95□□□□□ -0.34
RAB40A-201ENST00000304236 ERV3-1Q14264 604 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 ELOA3BQ3SY89 546 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 PLA1AQ53H76 456 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 GKN2Q86XP6 184 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 PLCZ1Q86YW0 608 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 ELOA3Q8NG57 546 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 OR4C3Q8NH37 302 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 GRPEL2Q8TAA5 225 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 HAVCR2Q8TDQ0 301 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 AKAP1Q92667 903 aaKnown RBP eCLIP12.95□□□□□ -0.34
RAB40A-201ENST00000304236 SLC38A3Q99624 504 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 C7orf50Q9BRJ6 194 aaKnown RBP12.95□□□□□ -0.34
RAB40A-201ENST00000304236 NDEL1Q9GZM8 345 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 EXOSC3Q9NQT5 275 aaKnown RBP12.95□□□□□ -0.34
RAB40A-201ENST00000304236 UBQLN4Q9NRR5 601 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 WDR70Q9NW82 654 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 GNG8Q9UK08 70 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 KLK13Q9UKR3 277 aa12.95□□□□□ -0.34
RAB40A-201ENST00000304236 TRBV2A0A0J9YWF9 115 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 A0A1B0GTQ1 180 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 A0A1B0GVT2 93 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 IMPA2O14732 288 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 PDCD5O14737 125 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 ARHGEF9O43307 516 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 EEF1E1O43324 174 aaKnown RBP12.94□□□□□ -0.34
RAB40A-201ENST00000304236 NAA10P41227 235 aaPredicted RBP12.94□□□□□ -0.34
RAB40A-201ENST00000304236 GABRA4P48169 554 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 CSNK1EP49674 416 aaKnown RBP12.94□□□□□ -0.34
RAB40A-201ENST00000304236 GZMKP49863 264 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 MMP15P51511 669 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 SLC25A1P53007 311 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 HCCSP53701 268 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 FAPQ12884 760 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 MAB21L1Q13394 359 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 HLA-BQ31612 363 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 YIF1BQ5BJH7 314 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 ASB18Q6ZVZ8 466 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 LRRC17Q8N6Y2 441 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 C7orf57Q8NEG2 295 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 OR51Q1Q8NH59 317 aa12.94□□□□□ -0.34
RAB40A-201ENST00000304236 LILRB4Q8NHJ6 448 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms