RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 GPR1P46091 355 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 STARP49675 285 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 GUCA2AQ02747 115 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 POU4F2Q12837 409 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 SLC6A19Q695T7 634 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 TMPRSS11FQ6ZWK6 438 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 GLB1L2Q8IW92 636 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 SLC35F2Q8IXU6 374 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 OR7G2Q8NG99 324 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 OR6N1Q8NGY5 312 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 CXorf40AQ8TE69 158 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 IGSF21Q96ID5 467 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 MRGPRX3Q96LB0 322 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 ZNF681Q96N22 645 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 CNN2Q99439 309 aaKnown RBP9.98□□□□□ -0.81
ZNF558-201ENST00000301475 TMEM185BQ9H7F4 350 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 CACYBPQ9HB71 228 aaKnown RBP9.98□□□□□ -0.81
ZNF558-201ENST00000301475 BIN3Q9NQY0 253 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 NCDNQ9UBB6 729 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 A0A1B0GTQ1 180 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 C17orf113A0A1B0GUU1 675 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 TMEM218A2RU14 115 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 H7C417 338 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 KPNA3O00505 521 aaPredicted RBP9.97□□□□□ -0.81
ZNF558-201ENST00000301475 ZFPL1O95159 310 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 F12P00748 615 aaPredicted RBP9.97□□□□□ -0.81
ZNF558-201ENST00000301475 BDKRB2P30411 391 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 MNDAP41218 407 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 MICBQ29980 383 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 C4orf46Q504U0 113 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 BEX5Q5H9J7 111 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 MFSD12Q6NUT3 480 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 RPL13AP3Q6NVV1 102 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.97□□□□□ -0.81
ZNF558-201ENST00000301475 RANBP3LQ86VV4 465 aaPredicted RBP9.97□□□□□ -0.81
ZNF558-201ENST00000301475 OR4K13Q8NH42 304 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 RNF166Q96A37 237 aaPredicted RBP9.97□□□□□ -0.81
ZNF558-201ENST00000301475 MS4A6EQ96DS6 147 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 TNFRSF13CQ96RJ3 184 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 GPR174Q9BXC1 333 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 APMAPQ9HDC9 416 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 PRDM7Q9NQW5 492 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 MTFP1Q9UDX5 166 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 A0A1W2PRU2 124 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 ACAA1P09110 424 aaPredicted RBP9.97□□□□□ -0.81
ZNF558-201ENST00000301475 OR2T7P0C7T2 308 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 CCL5P13501 91 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 PLAURQ03405 335 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 FHL1Q13642 323 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 DUSP5Q16690 384 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 NDUFAF6Q330K2 333 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 MRPL2Q5T653 305 aaKnown RBP9.97□□□□□ -0.81
ZNF558-201ENST00000301475 STAC2Q6ZMT1 411 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 NRSN1Q8IZ57 195 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 RNF113BQ8IZP6 322 aaKnown RBP9.97□□□□□ -0.81
ZNF558-201ENST00000301475 OR2L13Q8N349 312 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 OR1M1Q8NGA1 313 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 OR52E2Q8NGJ4 325 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 OR2T27Q8NH04 317 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 OR5K2Q8NHB8 316 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 OR14A16Q8NHC5 309 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 SFT2D1Q8WV19 159 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 ZNF559Q9BR84 538 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 MTHFD2LQ9H903 347 aaPredicted RBP9.97□□□□□ -0.81
ZNF558-201ENST00000301475 KCNE5Q9UJ90 142 aa9.97□□□□□ -0.81
ZNF558-201ENST00000301475 TBC1D3EA0A087X179 549 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.96□□□□□ -0.81
ZNF558-201ENST00000301475 H0YC42 278 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 SYN1P17600 705 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 GRPRP30550 384 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 MPIP34949 423 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 ABHD17CQ6PCB6 329 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 DND1Q8IYX4 353 aaKnown RBP9.96□□□□□ -0.81
ZNF558-201ENST00000301475 ZFP82Q8N141 532 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 SVBPQ8N300 66 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 KCNRGQ8N5I3 272 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 NUS1Q96E22 293 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 C10orf90Q96M02 699 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 PIGMQ9H3S5 423 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 PRSS16Q9NQE7 514 aa9.96□□□□□ -0.81
ZNF558-201ENST00000301475 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.96□□□□□ -0.81
ZNF558-201ENST00000301475 RNF222A6NCQ9 220 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 PEX12O00623 359 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 GPRIN2O60269 458 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 EIF3GO75821 320 aaKnown RBP eCLIP9.96□□□□□ -0.82
ZNF558-201ENST00000301475 RBBP9O75884 186 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 AKR7A3O95154 331 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 GNRH1P01148 92 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 CALCBP10092 127 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 HIST1H1CP16403 213 aaKnown RBP9.96□□□□□ -0.82
ZNF558-201ENST00000301475 FAUP35544 74 aaKnown RBP9.96□□□□□ -0.82
ZNF558-201ENST00000301475 ARHGAP19Q14CB8 494 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 SMAD2Q15796 467 aaKnown RBP9.96□□□□□ -0.82
ZNF558-201ENST00000301475 RPS4Y2Q8TD47 263 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 GRHL3Q8TE85 626 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 DOK4Q8TEW6 326 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 DVL3Q92997 716 aaPredicted RBP9.96□□□□□ -0.82
ZNF558-201ENST00000301475 ZNF471Q9BX82 626 aaPredicted RBP9.96□□□□□ -0.82
ZNF558-201ENST00000301475 CFHR5Q9BXR6 569 aa9.96□□□□□ -0.82
ZNF558-201ENST00000301475 TRPV4Q9HBA0 871 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms