RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PARPBPQ9NWS1 579 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 NCDNQ9UBB6 729 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 POLHQ9Y253 713 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 RPH3AQ9Y2J0 694 aaPredicted RBP12.25□□□□□ -0.45
CASC4-201ENST00000299957 IMPA2O14732 288 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 PPM1BO75688 479 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 SEMA4FO95754 770 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 RBMS1P29558 406 aaKnown RBP12.25□□□□□ -0.45
CASC4-201ENST00000299957 EXOSC2Q13868 293 aaKnown RBP12.25□□□□□ -0.45
CASC4-201ENST00000299957 UNQ6126/PRO20091Q6UXV3 157 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 TMEM185AQ8NFB2 350 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 OR51S1Q8NGJ8 323 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 GPR148Q8TDV2 347 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 ASB16Q96NS5 453 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 OR2M2Q96R28 347 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 MAN2C1Q9NTJ4 1040 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 SIRT4Q9Y6E7 314 aaPredicted RBP12.25□□□□□ -0.45
CASC4-201ENST00000299957 SPTAN1Q13813 2472 aaKnown RBP12.25□□□□□ -0.45
CASC4-201ENST00000299957 PARP14Q460N5 1801 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 IGHV3-20A0A0C4DH32 117 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 LINC01553A4QN01 128 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 CTSVO60911 334 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 CEACAM5P06731 702 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 PKLRP30613 574 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 EMDP50402 254 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 P2RX3P56373 397 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 TRAM1Q15629 374 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 NKAIN2Q5VXU1 208 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 TMEM225Q6GV28 225 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 CAMKMTQ7Z624 323 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 UBE3DQ7Z6J8 389 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 MARCH3Q86UD3 253 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 LIX1LQ8IVB5 337 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 SFXN5Q8TD22 340 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 BTBD2Q9BX70 525 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 ADAM29Q9UKF5 820 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 SYT5O00445 386 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 MPIG6BO95866 241 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 TACR3P29371 465 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 PRMT2P55345 433 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 GUCA2AQ02747 115 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 MEP1BQ16820 701 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 RHOUQ7L0Q8 258 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 OR6N1Q8NGY5 312 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 SLC37A2Q8TED4 501 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 DHRS1Q96LJ7 313 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 POTEKPQ9BYX7 375 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 TCEAL2Q9H3H9 227 aaPredicted RBP12.24□□□□□ -0.45
CASC4-201ENST00000299957 KCNK15Q9H427 330 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 NIPAL2Q9H841 368 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 COPZ2Q9P299 210 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 ZNF281Q9Y2X9 895 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 TEX13DA0A0J9YY54 714 aaPredicted RBP12.24□□□□□ -0.45
CASC4-201ENST00000299957 F5H5P2 479 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 ACOT7O00154 380 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 GREM1O60565 184 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 EML2O95834 649 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 WNT1P04628 370 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 BLKP51451 505 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 TRA2BP62995 288 aaKnown RBP12.24□□□□□ -0.45
CASC4-201ENST00000299957 ADAMTSL4Q6UY14 1074 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 MED25Q71SY5 747 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 ZAR1Q86SH2 424 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 ZNF546Q86UE3 836 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 PM20D2Q8IYS1 436 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 ACKR4Q9NPB9 350 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 P2RX6O15547 441 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 ATP1B1P05026 303 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 RIDAP52758 137 aaKnown RBP12.24□□□□□ -0.45
CASC4-201ENST00000299957 CDK5Q00535 292 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 POU4F2Q12837 409 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 ALG11Q2TAA5 492 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 TOR2AQ5JU69 321 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 KCTD18Q6PI47 426 aaPredicted RBP12.24□□□□□ -0.45
CASC4-201ENST00000299957 COX15Q7KZN9 410 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 OR13H1Q8NG92 308 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 OR4C3Q8NH37 302 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 SFXN1Q9H9B4 322 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 NRIP3Q9NQ35 241 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 NPAP1Q9NZP6 1156 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 TBX21Q9UL17 535 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 SLC22A13Q9Y226 551 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 ASB4Q9Y574 426 aa12.24□□□□□ -0.45
CASC4-201ENST00000299957 ZNF318Q5VUA4 2279 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 CTNSO60931 367 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 ST6GAL1P15907 406 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 TBXA2RP21731 343 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 CDK2P24941 298 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 PCBP4P57723 403 aaKnown RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 HAGHLQ6PII5 290 aaPredicted RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 CORO6Q6QEF8 472 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 KIRREL2Q6UWL6 708 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 C17orf107Q6ZR85 190 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 ZNF283Q8N7M2 679 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 DIO2Q92813 273 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 HHIPQ96QV1 700 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 INTS14Q96SY0 518 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 SMIM3Q9BZL3 60 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 CST11Q9H112 138 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms