RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 RFX4Q33E94 735 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 PDSS1Q5T2R2 415 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 WLSQ5T9L3 541 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 GFRALQ6UXV0 394 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 HIST3H2AQ7L7L0 130 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 NANOGNBQ7Z5D8 188 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 FNDC9Q8TBE3 224 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 ZPLD1Q8TCW7 415 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 DNAJC9Q8WXX5 260 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 HIST1H2ACQ93077 130 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 SAMD8Q96LT4 415 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 MBOAT4Q96T53 435 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 C8orf4Q9NR00 106 aa19.48■□□□□ 0.71
PDLIM3-203ENST00000284771 CLCA1A8K7I4 914 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 MCIDASD6RGH6 385 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 EIF1BO60739 113 aaKnown RBP19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 AQP8O94778 261 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 F13BP05160 661 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 EDN3P14138 238 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 GTF2E2P29084 291 aaKnown RBP19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 VHLP40337 213 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 NPRL3Q12980 569 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 SMARCD3Q6STE5 483 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 NHLRC1Q6VVB1 395 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 IGFN1Q86VF2 1251 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 PM20D2Q8IYS1 436 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 GABARAPL3Q9BY60 117 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 TOR3AQ9H497 397 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 TIGARQ9NQ88 270 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 SMPD3Q9NY59 655 aaPredicted RBP19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 CDH10Q9Y6N8 788 aa19.47■□□□□ 0.71
PDLIM3-203ENST00000284771 E9PQ18 207 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 C11orf98E9PRG8 122 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 BCKDKO14874 412 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 TGM6O95932 706 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 AHCYP23526 432 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 CRISP1P54107 249 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 PUDPQ08623 228 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 CLEC12AQ5QGZ9 265 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 TMEM236Q5W0B7 351 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 CLDN22Q8N7P3 220 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 FANK1Q8TC84 345 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 FANCFQ9NPI8 374 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 KLHL13Q9P2N7 655 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 ING1Q9UK53 422 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 ZNF835Q9Y2P0 537 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 POLEQ07864 2286 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 H3BN98 237 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 NDUFB2O95178 105 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 TPOP07202 933 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 POU1F1P28069 291 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 RAD23AP54725 363 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 PRPS1P60891 318 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 ZP4Q12836 540 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 PTGES3Q15185 160 aaKnown RBP19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 ANKDD1AQ495B1 522 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 ALG10Q5BKT4 473 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 TMEM225Q6GV28 225 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 RTL6Q6ICC9 239 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 ZNF585AQ6P3V2 769 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 IZUMO2Q6UXV1 221 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 MED12LQ86YW9 2145 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 ADPRHL1Q8NDY3 354 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 FAM57AQ8TBR7 257 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 GRIP2Q9C0E4 1043 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 RIBC2Q9H4K1 309 aa19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 PAQR5Q9NXK6 330 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-203ENST00000284771 AHRRA9YTQ3 701 aa19.45■□□□□ 0.7
PDLIM3-203ENST00000284771 RCBTB2O95199 551 aa19.45■□□□□ 0.7
PDLIM3-203ENST00000284771 PRB1P04280 392 aa19.45■□□□□ 0.7
PDLIM3-203ENST00000284771 ESRRGP62508 458 aa19.45■□□□□ 0.7
PDLIM3-203ENST00000284771 FCRLAQ7L513 359 aa19.45■□□□□ 0.7
PDLIM3-203ENST00000284771 CD163Q86VB7 1156 aa19.45■□□□□ 0.7
PDLIM3-203ENST00000284771 ABHD3Q8WU67 409 aa19.45■□□□□ 0.7
PDLIM3-203ENST00000284771 CLCF1Q9UBD9 225 aa19.45■□□□□ 0.7
PDLIM3-203ENST00000284771 ADAM18Q9Y3Q7 739 aa19.45■□□□□ 0.7
PDLIM3-203ENST00000284771 ZNF716A6NP11 495 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 BHLHE40O14503 412 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 RNF13O43567 381 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 SLC19A2O60779 497 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 ABOP16442 354 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 GIPRP48546 466 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 SLC17A1Q14916 467 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 ABLIM2Q6H8Q1 611 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 ACSM5Q6NUN0 579 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 CHMP1BQ7LBR1 199 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 GPAT4Q86UL3 456 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 WDFY1Q8IWB7 410 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 IQCF1Q8N6M8 205 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 OR4Q3Q8NH05 313 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 RNF128Q8TEB7 428 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 GPX7Q96SL4 187 aaPredicted RBP19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 TACO1Q9BSH4 297 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 NAA11Q9BSU3 229 aaPredicted RBP19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 TSSK6Q9BXA6 273 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 VCX3BQ9H321 246 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 NRIP3Q9NQ35 241 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 FAM118AQ9NWS6 357 aa19.44■□□□□ 0.7
PDLIM3-203ENST00000284771 LOC102725191A0A1B0GVB3 256 aa19.43■□□□□ 0.7
PDLIM3-203ENST00000284771 A0A1W2PNV4 684 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms